Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC097486.1-201ENST00000515331 210 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
LIMK1P53667 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.6□□□□□ -1.51
LIMK1P53667 SULT1C2P2-201ENST00000562517 294 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 GARSP1-201ENST00000570895 719 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC006116.3-201ENST00000592968 361 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 TAS2R6P-201ENST00000605022 826 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 OR11H2-202ENST00000641517 1085 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 AP005435.3-201ENST00000531260 3198 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LIMK1P53667 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 ADAM24P-201ENST00000398655 2101 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LIMK1P53667 OR9K1P-202ENST00000641111 3217 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK1P53667 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LIMK1P53667 RNU1-106P-201ENST00000384382 164 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 MIR7-1-201ENST00000384871 110 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 VDAC2P1-201ENST00000399358 958 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 MYL6P5-201ENST00000412707 459 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 GABARAPL3-201ENST00000412799 354 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AL357752.1-201ENST00000412817 349 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 PTCD2P2-201ENST00000415579 1095 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 RPL26P29-201ENST00000415623 438 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK1P53667 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.59□□□□□ -1.51
LIMK1P53667 AL731534.1-201ENST00000434711 269 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 RPS3AP38-201ENST00000435889 763 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AC073648.4-201ENST00000442655 781 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AC022431.1-201ENST00000450941 438 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AL389915.2-201ENST00000454576 441 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 RN7SL346P-201ENST00000491561 294 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AC074255.1-201ENST00000511259 501 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 TOMM22P4-201ENST00000511318 336 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.59□□□□□ -1.51
LIMK1P53667 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.59□□□□□ -1.51
LIMK1P53667 AC012467.1-201ENST00000607740 256 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 AL118508.4-201ENST00000624142 1176 ntBASIC5.59□□□□□ -1.51
LIMK1P53667 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.59□□□□□ -1.51
LIMK1P53667 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK1P53667 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.59□□□□□ -1.52
LIMK1P53667 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LIMK1P53667 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.52
LIMK1P53667 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LIMK1P53667 MIR365B-201ENST00000362317 111 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 RNU1-77P-201ENST00000390868 162 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 AC013470.3-201ENST00000420252 1194 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 AC108075.1-201ENST00000424692 529 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.58□□□□□ -1.52
LIMK1P53667 AL049745.1-201ENST00000433953 286 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 PA2G4P6-201ENST00000438325 1197 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 SDC4P-201ENST00000453285 601 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 RN7SL352P-201ENST00000466002 277 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 RPS18P6-201ENST00000476880 458 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
LIMK1P53667 RNU6-319P-201ENST00000516025 108 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 SEC11B-201ENST00000518383 499 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.58□□□□□ -1.52
LIMK1P53667 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.58□□□□□ -1.52
LIMK1P53667 AC026616.1-201ENST00000523157 525 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 OR10D4P-201ENST00000525892 951 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.58□□□□□ -1.52
LIMK1P53667 AP004607.2-201ENST00000533949 322 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.58□□□□□ -1.52
LIMK1P53667 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.58□□□□□ -1.52
LIMK1P53667 AC002069.2-201ENST00000603580 883 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 FAM25E-202ENST00000608562 189 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.58□□□□□ -1.52
LIMK1P53667 MIR378J-201ENST00000611988 109 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms