Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
MRE11P49959 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
MRE11P49959 AC007938.2-201ENST00000604666 2634 ntBASIC6.81□□□□□ -1.32
MRE11P49959 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MRE11P49959 AL022311.1-201ENST00000623726 19416 ntBASIC6.81□□□□□ -1.32
MRE11P49959 Z83820.1-201ENST00000456978 1499 ntBASIC6.81□□□□□ -1.32
MRE11P49959 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 RNU6-792P-201ENST00000363490 107 ntBASIC6.81□□□□□ -1.32
MRE11P49959 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
MRE11P49959 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.81□□□□□ -1.32
MRE11P49959 RPL37P18-201ENST00000411602 243 ntBASIC6.81□□□□□ -1.32
MRE11P49959 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.81□□□□□ -1.32
MRE11P49959 RPA2P2-201ENST00000419698 796 ntBASIC6.81□□□□□ -1.32
MRE11P49959 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 MTND5P25-201ENST00000430499 799 ntBASIC6.81□□□□□ -1.32
MRE11P49959 DEFA9P-201ENST00000433042 285 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.81□□□□□ -1.32
MRE11P49959 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.81□□□□□ -1.32
MRE11P49959 AC104629.2-201ENST00000468627 598 ntBASIC6.81□□□□□ -1.32
MRE11P49959 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 AP002453.1-201ENST00000492327 668 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.81□□□□□ -1.32
MRE11P49959 AC020699.1-201ENST00000505161 445 ntBASIC6.81□□□□□ -1.32
MRE11P49959 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.81□□□□□ -1.32
MRE11P49959 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 GAPDHP62-201ENST00000515313 990 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AL671862.1-201ENST00000515851 349 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.81□□□□□ -1.32
MRE11P49959 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 AC087894.1-201ENST00000538359 518 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AL121594.2-201ENST00000541658 472 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.81□□□□□ -1.32
MRE11P49959 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.81□□□□□ -1.32
MRE11P49959 ELOCP28-201ENST00000590044 317 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AC022022.2-201ENST00000602989 360 ntBASIC6.81□□□□□ -1.32
MRE11P49959 SUMO2P15-201ENST00000604285 278 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 AC112694.2-201ENST00000623697 768 ntBASIC6.81□□□□□ -1.32
MRE11P49959 AP002967.1-201ENST00000624203 539 ntBASIC6.81□□□□□ -1.32
MRE11P49959 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.81□□□□□ -1.32
MRE11P49959 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MRE11P49959 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MRE11P49959 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MRE11P49959 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.81□□□□□ -1.32
MRE11P49959 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
MRE11P49959 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MRE11P49959 HSPA8P14-201ENST00000552265 1805 ntBASIC6.8□□□□□ -1.32
MRE11P49959 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
MRE11P49959 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
MRE11P49959 SNORA70-201ENST00000384436 135 ntBASIC6.8□□□□□ -1.32
MRE11P49959 MIR143-201ENST00000385300 106 ntBASIC6.8□□□□□ -1.32
MRE11P49959 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
MRE11P49959 HYALP1-201ENST00000417674 1279 ntBASIC6.8□□□□□ -1.32
MRE11P49959 MTCO2P21-201ENST00000419780 677 ntBASIC6.8□□□□□ -1.32
MRE11P49959 XKRYP1-201ENST00000423438 492 ntBASIC6.8□□□□□ -1.32
MRE11P49959 SRSF1P1-201ENST00000424058 520 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 AC009784.1-201ENST00000426484 460 ntBASIC6.8□□□□□ -1.32
MRE11P49959 XKRYP2-201ENST00000432915 492 ntBASIC6.8□□□□□ -1.32
MRE11P49959 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 AC010240.2-201ENST00000445363 1205 ntBASIC6.8□□□□□ -1.32
MRE11P49959 HMGN1P36-201ENST00000446623 298 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 DNAJB5P1-201ENST00000454004 806 ntBASIC6.8□□□□□ -1.32
MRE11P49959 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 RNU7-157P-201ENST00000459600 66 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AL672167.3-201ENST00000465951 960 ntBASIC6.8□□□□□ -1.32
MRE11P49959 RN7SL423P-201ENST00000486202 304 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 GOLGA5P1-201ENST00000507317 980 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.8□□□□□ -1.32
MRE11P49959 RN7SKP35-201ENST00000517210 151 ntBASIC6.8□□□□□ -1.32
MRE11P49959 MTATP6P15-201ENST00000527233 835 ntBASIC6.8□□□□□ -1.32
MRE11P49959 UBTFL10-201ENST00000528532 562 ntBASIC6.8□□□□□ -1.32
MRE11P49959 OR4A42P-201ENST00000531397 938 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 AC074029.2-201ENST00000551045 634 ntBASIC6.8□□□□□ -1.32
MRE11P49959 LSM3P2-201ENST00000551246 273 ntBASIC6.8□□□□□ -1.32
MRE11P49959 MTCYBP28-201ENST00000566728 1132 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.8□□□□□ -1.32
MRE11P49959 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.8□□□□□ -1.32
MRE11P49959 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.8□□□□□ -1.32
MRE11P49959 AC245389.2-201ENST00000616023 576 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.8□□□□□ -1.32
MRE11P49959 AC242843.1-201ENST00000618702 573 ntBASIC6.8□□□□□ -1.32
MRE11P49959 AC105105.5-201ENST00000622635 1294 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms