Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL12P48061 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL12P48061 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
CXCL12P48061 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 GLULP6-201ENST00000399502 913 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL12P48061 NPM1P25-201ENST00000429734 854 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 AL161722.2-201ENST00000434731 981 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 RPL5P25-201ENST00000441148 775 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL12P48061 RN7SL319P-201ENST00000480656 221 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CXCL12P48061 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL12P48061 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL12P48061 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.2□□□□□ -1.58
CXCL12P48061 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
CXCL12P48061 NMNAT1P1-201ENST00000554095 876 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 AC018690.1-201ENST00000608144 626 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 AC016590.3-201ENST00000611171 753 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 MIR6758-201ENST00000620653 63 ntBASIC5.2□□□□□ -1.58
CXCL12P48061 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL12P48061 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CXCL12P48061 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL12P48061 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 AC015799.1-201ENST00000622996 3122 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL12P48061 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
CXCL12P48061 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL12P48061 HSPD1P8-201ENST00000400121 1658 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CXCL12P48061 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CXCL12P48061 AC126755.2-208ENST00000327792 462 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 AC138969.1-213ENST00000331436 462 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 RPL32P3-201ENST00000359025 275 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CXCL12P48061 AL121977.1-201ENST00000401636 979 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL12P48061 AL137845.2-201ENST00000444292 988 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 AL161722.1-201ENST00000446972 1032 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 RPS23P7-201ENST00000466210 444 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 AC093720.1-201ENST00000505681 714 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 GAPDHP56-201ENST00000506031 988 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL12P48061 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.19□□□□□ -1.58
CXCL12P48061 GCSHP4-201ENST00000538792 439 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 PARP1P2-201ENST00000556806 195 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CXCL12P48061 AC019193.2-201ENST00000610012 634 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL12P48061 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 TTC41P-205ENST00000551270 3963 ntBASIC5.19□□□□□ -1.58
CXCL12P48061 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL12P48061 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CXCL12P48061 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL12P48061 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL12P48061 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL12P48061 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 AP000432.2-201ENST00000624164 2048 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL12P48061 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CXCL12P48061 P2RY10P2-201ENST00000416730 913 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms