Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC012512.1-201ENST00000446594 718 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 PPIAP19-201ENST00000486414 492 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC069304.1-201ENST00000491593 704 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC005412.2-201ENST00000492004 341 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC073073.1-201ENST00000493920 463 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC1A1P43005 RPS4XP20-201ENST00000505751 772 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC105031.1-201ENST00000518550 476 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AL390334.1-201ENST00000556395 450 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AC007066.2-202ENST00000566531 914 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC011840.5-201ENST00000582125 771 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC008521.2-201ENST00000591021 259 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC126175.1-201ENST00000617041 758 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AC010809.3-201ENST00000621310 641 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC1A1P43005 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC1A1P43005 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC1A1P43005 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC1A1P43005 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC1A1P43005 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AL139148.1-201ENST00000427122 680 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 RPS4XP16-201ENST00000427198 791 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 KCTD9P1-201ENST00000430462 1167 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 CYCSP6-201ENST00000434498 302 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AL157385.1-201ENST00000446973 268 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 AC004980.3-201ENST00000447046 365 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 MRPL35P2-201ENST00000448009 511 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 RN7SL547P-201ENST00000490793 290 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC1A1P43005 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AP006245.2-201ENST00000522004 300 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC1A1P43005 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC1A1P43005 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC1A1P43005 AL122125.1-201ENST00000616999 600 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 AL357153.4-201ENST00000620487 1016 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC1A1P43005 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 AC007996.1-201ENST00000620414 2821 ntBASIC5.41□□□□□ -1.54
SLC1A1P43005 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC1A1P43005 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC1A1P43005 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
SLC1A1P43005 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC1A1P43005 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SLC1A1P43005 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC1A1P43005 RNU6-673P-201ENST00000365084 104 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC1A1P43005 SNORA67-201ENST00000384423 137 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC009804.1-201ENST00000400949 179 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 MIR1182-201ENST00000408363 97 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 CTSL3P-202ENST00000412179 788 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC1A1P43005 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC1A1P43005 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC1A1P43005 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC1A1P43005 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC1A1P43005 GAPDHP34-201ENST00000432112 823 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC1A1P43005 Z92846.1-201ENST00000456203 268 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC091180.1-201ENST00000462104 372 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC020779.1-201ENST00000478757 796 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 RN7SL441P-201ENST00000492388 296 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC1A1P43005 GTF2F2P1-201ENST00000511083 675 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC1A1P43005 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC1A1P43005 NDUFB4P11-201ENST00000560510 395 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC069307.1-201ENST00000602820 447 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC1A1P43005 AL139407.1-201ENST00000613826 1175 ntBASIC5.4□□□□□ -1.54
SLC1A1P43005 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC1A1P43005 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.4□□□□□ -1.55
SLC1A1P43005 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SLC1A1P43005 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC1A1P43005 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC1A1P43005 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SLC1A1P43005 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SLC1A1P43005 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC1A1P43005 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC1A1P43005 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC1A1P43005 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms