Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.579-201ENST00000390939 94 ntBASIC7.55□□□□□ -1.2
VARSP26640 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.55□□□□□ -1.2
VARSP26640 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.55□□□□□ -1.2
VARSP26640 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.55□□□□□ -1.2
VARSP26640 Y_RNA.605-201ENST00000410577 105 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 AC007559.1-201ENST00000428736 355 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC019185.3-201ENST00000438805 323 ntBASIC7.55□□□□□ -1.2
VARSP26640 SEPT14P3-201ENST00000439401 183 ntBASIC7.55□□□□□ -1.2
VARSP26640 AL732372.2-207ENST00000445840 183 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC239798.1-201ENST00000449024 1176 ntBASIC7.55□□□□□ -1.2
VARSP26640 AL929410.2-201ENST00000451170 189 ntBASIC7.55□□□□□ -1.2
VARSP26640 SEPT14P2-201ENST00000453405 183 ntBASIC7.55□□□□□ -1.2
VARSP26640 MED28P8-201ENST00000454831 521 ntBASIC7.55□□□□□ -1.2
VARSP26640 CHIAP1-201ENST00000456220 995 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 Y_RNA.631-201ENST00000459607 101 ntBASIC7.55□□□□□ -1.2
VARSP26640 RPS4XP19-201ENST00000460237 736 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC104849.1-201ENST00000462623 405 ntBASIC7.55□□□□□ -1.2
VARSP26640 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.55□□□□□ -1.2
VARSP26640 AC093809.1-201ENST00000509155 340 ntBASIC7.55□□□□□ -1.2
VARSP26640 SEPT14P4-201ENST00000513445 186 ntBASIC7.55□□□□□ -1.2
VARSP26640 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.55□□□□□ -1.2
VARSP26640 AP005902.2-201ENST00000518393 307 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC008429.4-201ENST00000521201 182 ntBASIC7.55□□□□□ -1.2
VARSP26640 FO082796.1-201ENST00000523795 183 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 HNRNPCP8-201ENST00000528764 888 ntBASIC7.55□□□□□ -1.2
VARSP26640 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 AC018558.5-201ENST00000565840 952 ntBASIC7.55□□□□□ -1.2
VARSP26640 ZNF322P1-201ENST00000568013 1209 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC141257.3-201ENST00000572906 215 ntBASIC7.55□□□□□ -1.2
VARSP26640 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.55□□□□□ -1.2
VARSP26640 PPIAP14-201ENST00000577627 496 ntBASIC7.55□□□□□ -1.2
VARSP26640 NRBF2P1-201ENST00000587407 859 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.55□□□□□ -1.2
VARSP26640 AC008638.3-201ENST00000603341 463 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC245014.2-201ENST00000603689 287 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC016925.2-201ENST00000605108 242 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC246785.4-201ENST00000605374 287 ntBASIC7.55□□□□□ -1.2
VARSP26640 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.55□□□□□ -1.2
VARSP26640 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.55□□□□□ -1.2
VARSP26640 AC068831.8-201ENST00000620171 435 ntBASIC7.55□□□□□ -1.2
VARSP26640 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.55□□□□□ -1.2
VARSP26640 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.55□□□□□ -1.2
VARSP26640 THAP12P7-201ENST00000520248 2290 ntBASIC7.55□□□□□ -1.2
VARSP26640 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.55□□□□□ -1.2
VARSP26640 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
VARSP26640 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 CDR1-202ENST00000625883 1485 ntBASIC7.55□□□□□ -1.2
VARSP26640 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.55□□□□□ -1.2
VARSP26640 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
VARSP26640 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
VARSP26640 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 MFSD8-227ENST00000641393 4069 ntBASIC7.54□□□□□ -1.2
VARSP26640 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.54□□□□□ -1.2
VARSP26640 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 MROH3P-201ENST00000435735 2676 ntBASIC7.54□□□□□ -1.2
VARSP26640 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 AC011155.1-201ENST00000316512 456 ntBASIC7.54□□□□□ -1.2
VARSP26640 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
VARSP26640 AL589647.1-201ENST00000402485 466 ntBASIC7.54□□□□□ -1.2
VARSP26640 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 RN7SKP29-201ENST00000410957 272 ntBASIC7.54□□□□□ -1.2
VARSP26640 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 GAPDHP49-201ENST00000421421 961 ntBASIC7.54□□□□□ -1.2
VARSP26640 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 AL583843.1-201ENST00000456070 346 ntBASIC7.54□□□□□ -1.2
VARSP26640 AC010307.1-201ENST00000467206 836 ntBASIC7.54□□□□□ -1.2
VARSP26640 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.54□□□□□ -1.2
VARSP26640 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.54□□□□□ -1.2
VARSP26640 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.54□□□□□ -1.2
VARSP26640 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms