Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PTPREP23469 ATP5BP1-201ENST00000411980 1574 ntBASIC8.69□□□□□ -1.02
PTPREP23469 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PTPREP23469 ASNSP6-201ENST00000592770 1618 ntBASIC8.69□□□□□ -1.02
PTPREP23469 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.69□□□□□ -1.02
PTPREP23469 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 RPL12P38-202ENST00000588627 2319 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
PTPREP23469 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
PTPREP23469 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.68□□□□□ -1.02
PTPREP23469 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 RNU6-702P-201ENST00000364982 107 ntBASIC8.68□□□□□ -1.02
PTPREP23469 U3.14-201ENST00000365363 227 ntBASIC8.68□□□□□ -1.02
PTPREP23469 RNU6-359P-201ENST00000365466 108 ntBASIC8.68□□□□□ -1.02
PTPREP23469 RNU1-122P-201ENST00000365538 156 ntBASIC8.68□□□□□ -1.02
PTPREP23469 RNU6-1263P-201ENST00000384601 106 ntBASIC8.68□□□□□ -1.02
PTPREP23469 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
PTPREP23469 AL450338.1-201ENST00000407987 512 ntBASIC8.68□□□□□ -1.02
PTPREP23469 GAS8-AS1-201ENST00000408886 435 ntBASIC8.68□□□□□ -1.02
PTPREP23469 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 RAC1P4-201ENST00000419413 579 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AL590365.1-201ENST00000450788 243 ntBASIC8.68□□□□□ -1.02
PTPREP23469 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8.68□□□□□ -1.02
PTPREP23469 RN7SL456P-201ENST00000469290 295 ntBASIC8.68□□□□□ -1.02
PTPREP23469 RPL7P39-201ENST00000481157 744 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 AC108078.3-201ENST00000502633 489 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AC010587.1-201ENST00000505809 469 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.68□□□□□ -1.02
PTPREP23469 SNX18P27-201ENST00000523611 779 ntBASIC8.68□□□□□ -1.02
PTPREP23469 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
PTPREP23469 AC087241.2-201ENST00000535801 324 ntBASIC8.68□□□□□ -1.02
PTPREP23469 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 HYKK-203ENST00000563233 734 ntTSL 2 BASIC8.68□□□□□ -1.02
PTPREP23469 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.68□□□□□ -1.02
PTPREP23469 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPREP23469 AC103710.3-201ENST00000608157 948 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AC005899.6-201ENST00000620729 297 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AL683826.1-201ENST00000624104 627 ntBASIC8.68□□□□□ -1.02
PTPREP23469 AC006453.3-201ENST00000635891 377 ntBASIC8.68□□□□□ -1.02
PTPREP23469 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PTPREP23469 CASC19-212ENST00000641153 1287 ntBASIC8.68□□□□□ -1.02
PTPREP23469 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.68□□□□□ -1.02
PTPREP23469 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.68□□□□□ -1.02
PTPREP23469 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.68□□□□□ -1.02
PTPREP23469 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
PTPREP23469 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 SEC63P2-201ENST00000503863 1939 ntBASIC8.68□□□□□ -1.02
PTPREP23469 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PTPREP23469 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
PTPREP23469 AC131649.2-201ENST00000624925 4439 ntBASIC8.68□□□□□ -1.02
PTPREP23469 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPREP23469 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPREP23469 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 AC005294.1-201ENST00000355509 281 ntBASIC8.67□□□□□ -1.02
PTPREP23469 OR11H13P-201ENST00000359695 979 ntBASIC8.67□□□□□ -1.02
PTPREP23469 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
PTPREP23469 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 MIR555-201ENST00000384987 96 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC087752.1-201ENST00000391360 558 ntBASIC8.67□□□□□ -1.02
PTPREP23469 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 SNORA2C-201ENST00000408564 137 ntBASIC8.67□□□□□ -1.02
PTPREP23469 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 MTCO1P12-201ENST00000414273 1543 ntBASIC8.67□□□□□ -1.02
PTPREP23469 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPREP23469 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPREP23469 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms