Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.85□□□□□ -1.63
CCL4P13236 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCL4P13236 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL4P13236 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 AC018628.1-201ENST00000624147 3819 ntBASIC4.84□□□□□ -1.63
CCL4P13236 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 NLRP3P1-201ENST00000622303 1785 ntBASIC4.84□□□□□ -1.63
CCL4P13236 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCL4P13236 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCL4P13236 OR9G4-201ENST00000302957 984 ntBASIC4.84□□□□□ -1.63
CCL4P13236 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCL4P13236 Z97832.1-201ENST00000402490 328 ntBASIC4.84□□□□□ -1.63
CCL4P13236 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL4P13236 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL4P13236 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL4P13236 REG1CP-206ENST00000447469 496 ntBASIC4.84□□□□□ -1.63
CCL4P13236 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.84□□□□□ -1.63
CCL4P13236 snoU13.29-201ENST00000459370 104 ntBASIC4.84□□□□□ -1.63
CCL4P13236 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL4P13236 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCL4P13236 UBE2FP2-201ENST00000566646 462 ntBASIC4.84□□□□□ -1.63
CCL4P13236 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL4P13236 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 AP001357.1-201ENST00000586304 1053 ntBASIC4.84□□□□□ -1.63
CCL4P13236 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL4P13236 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL4P13236 AF230666.2-201ENST00000602328 725 ntBASIC4.84□□□□□ -1.63
CCL4P13236 AP005432.2-201ENST00000608162 586 ntBASIC4.84□□□□□ -1.63
CCL4P13236 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.84□□□□□ -1.63
CCL4P13236 AC105105.5-201ENST00000622635 1294 ntBASIC4.84□□□□□ -1.63
CCL4P13236 AP000346.3-201ENST00000622821 210 ntBASIC4.84□□□□□ -1.63
CCL4P13236 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL4P13236 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 AL137058.3-201ENST00000624531 3099 ntBASIC4.84□□□□□ -1.63
CCL4P13236 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL4P13236 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.84□□□□□ -1.64
CCL4P13236 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.84□□□□□ -1.64
CCL4P13236 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCL4P13236 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCL4P13236 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CCL4P13236 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL4P13236 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 AC010132.2-201ENST00000295493 1043 ntBASIC4.83□□□□□ -1.64
CCL4P13236 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL4P13236 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 RNA5SP191-201ENST00000362585 102 ntBASIC4.83□□□□□ -1.64
CCL4P13236 RN7SKP185-201ENST00000362813 326 ntBASIC4.83□□□□□ -1.64
CCL4P13236 RNU6-398P-201ENST00000384143 109 ntBASIC4.83□□□□□ -1.64
CCL4P13236 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL4P13236 RPL12P43-201ENST00000420608 499 ntBASIC4.83□□□□□ -1.64
CCL4P13236 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.83□□□□□ -1.64
CCL4P13236 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 RPL7P11-201ENST00000437586 658 ntBASIC4.83□□□□□ -1.64
CCL4P13236 AL138878.2-201ENST00000440581 1241 ntBASIC4.83□□□□□ -1.64
CCL4P13236 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL4P13236 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL4P13236 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL4P13236 IGHV5-78-201ENST00000450948 295 ntBASIC4.83□□□□□ -1.64
CCL4P13236 RN7SL443P-201ENST00000464331 290 ntBASIC4.83□□□□□ -1.64
CCL4P13236 RPL5P22-201ENST00000480199 884 ntBASIC4.83□□□□□ -1.64
CCL4P13236 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL4P13236 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL4P13236 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 AC018552.1-201ENST00000562099 811 ntBASIC4.83□□□□□ -1.64
CCL4P13236 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL4P13236 AC234771.5-201ENST00000600161 514 ntBASIC4.83□□□□□ -1.64
CCL4P13236 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL4P13236 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL4P13236 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms