Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 AC006338.2-201ENST00000616864 791 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC244100.4-201ENST00000617747 388 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 AC003992.1-201ENST00000635364 557 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 AL390237.1-201ENST00000404226 1415 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
COL6A2P12110 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 Y_RNA.465-201ENST00000384293 102 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 MRPL32P1-201ENST00000406301 247 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 Y_RNA.619-201ENST00000410951 90 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC006960.1-201ENST00000419980 153 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 CDC42P6-201ENST00000421246 576 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 DLGAP5P1-201ENST00000430307 464 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL365220.1-201ENST00000432923 399 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 MTND4P6-201ENST00000438297 472 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 PA2G4P1-201ENST00000442248 1197 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 RPS27AP2-201ENST00000457576 465 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 RN7SL372P-201ENST00000461982 298 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC012123.2-201ENST00000485809 248 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL035690.1-201ENST00000490892 383 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.25□□□□□ -1.41
COL6A2P12110 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC105420.1-201ENST00000504389 582 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC093870.1-201ENST00000506837 213 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC008868.1-201ENST00000509786 737 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 BTG4P1-201ENST00000510421 183 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC130366.1-201ENST00000526505 1192 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.25□□□□□ -1.41
COL6A2P12110 OR6M2P-201ENST00000529831 871 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC027807.1-201ENST00000559921 996 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AADACP1-206ENST00000561502 1193 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 ATP5F1P7-201ENST00000567330 760 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 FAM106CP-201ENST00000582212 507 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.25□□□□□ -1.41
COL6A2P12110 RPL29P33-201ENST00000587474 316 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 NPIPB1P-202ENST00000588786 828 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 OR7E19P-202ENST00000589942 844 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 VN1R90P-201ENST00000595717 726 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 AL591222.2-201ENST00000604443 754 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL392112.1-201ENST00000605115 829 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC004492.1-201ENST00000607036 742 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC245297.2-201ENST00000610119 565 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC006924.1-201ENST00000610750 559 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 VN1R74P-201ENST00000613259 503 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 MIR7159-201ENST00000620587 66 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AL359715.5-201ENST00000623431 443 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC091931.1-201ENST00000623488 728 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 AC084035.1-201ENST00000634543 607 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.25□□□□□ -1.41
COL6A2P12110 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL6A2P12110 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
COL6A2P12110 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 325.9 ms