Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC090236.2-201ENST00000587933 1101 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.15□□□□□ -1.59
CLPTM1O96005 AC009237.13-201ENST00000603193 276 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 MIR6809-201ENST00000612189 116 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 AL021918.2-201ENST00000613415 194 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 AL138960.2-201ENST00000625145 535 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 AC073869.10-201ENST00000642016 354 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 NEAT1-202ENST00000501122 22743 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLPTM1O96005 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
CLPTM1O96005 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.15□□□□□ -1.59
CLPTM1O96005 GNL2P1-201ENST00000451274 2190 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 AC083843.3-201ENST00000623679 2186 ntBASIC5.15□□□□□ -1.59
CLPTM1O96005 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC126323.6-202ENST00000568092 3511 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AL022322.2-201ENST00000624072 20397 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC024341.1-201ENST00000526444 1552 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLPTM1O96005 RNA5SP477-201ENST00000362639 119 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 Y_RNA.110-201ENST00000363220 99 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLPTM1O96005 RNU6-729P-201ENST00000384399 107 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC007738.1-201ENST00000413892 348 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 OR2AH1P-201ENST00000425717 928 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AL590623.1-201ENST00000427864 105 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 RPL7P56-201ENST00000429441 717 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 ZFAND6P1-201ENST00000434138 605 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 SDR42E1P3-201ENST00000438345 502 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 NANOGP9-201ENST00000439890 892 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 CFL1P4-201ENST00000451536 498 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 HLA-DPA3-207ENST00000454398 229 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.14□□□□□ -1.59
CLPTM1O96005 C1DP3-201ENST00000455013 423 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 RN7SL515P-201ENST00000463999 297 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AL591473.1-201ENST00000464297 313 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC092865.4-201ENST00000477936 615 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 RN7SL193P-201ENST00000491708 276 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC008629.2-201ENST00000503783 483 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 MTND3P3-201ENST00000505004 126 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC011411.1-201ENST00000509592 876 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 Y_RNA.667-201ENST00000516212 107 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 RNA5SP438-201ENST00000516561 112 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC104997.1-201ENST00000519761 717 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 OR5AM1P-201ENST00000532136 1032 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC068305.2-201ENST00000550567 1205 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.14□□□□□ -1.59
CLPTM1O96005 NDUFA5P11-201ENST00000567995 343 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC005244.1-201ENST00000582566 339 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AL365181.4-201ENST00000609800 547 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 AC096586.2-201ENST00000610260 441 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 AL162233.1-201ENST00000620014 944 ntBASIC5.14□□□□□ -1.59
CLPTM1O96005 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.14□□□□□ -1.59
CLPTM1O96005 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.14□□□□□ -1.59
CLPTM1O96005 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CLPTM1O96005 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.14□□□□□ -1.59
CLPTM1O96005 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLPTM1O96005 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLPTM1O96005 CR382285.2-201ENST00000624662 1495 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLPTM1O96005 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.13□□□□□ -1.59
CLPTM1O96005 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 SUGT1P2-201ENST00000379452 992 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 OR1F12-201ENST00000402365 945 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AL589994.1-201ENST00000404962 340 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AC017019.1-201ENST00000426129 261 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AL445928.1-201ENST00000435545 222 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 THAP12P8-201ENST00000447914 2115 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 RPS23P2-201ENST00000463671 415 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AC098583.1-201ENST00000480875 255 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms