Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SNORD39.2-201ENST00000579995 76 ntBASIC6.42□□□□□ -1.38
MBD4O95243 LSM1P2-201ENST00000604911 322 ntBASIC6.42□□□□□ -1.38
MBD4O95243 AL356608.1-201ENST00000610034 820 ntBASIC6.42□□□□□ -1.38
MBD4O95243 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.42□□□□□ -1.38
MBD4O95243 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.42□□□□□ -1.38
MBD4O95243 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
MBD4O95243 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MBD4O95243 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
MBD4O95243 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MBD4O95243 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MBD4O95243 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MBD4O95243 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MBD4O95243 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MBD4O95243 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MBD4O95243 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.41□□□□□ -1.38
MBD4O95243 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.41□□□□□ -1.38
MBD4O95243 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MBD4O95243 AC010132.2-201ENST00000295493 1043 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC092681.1-201ENST00000297369 291 ntBASIC6.41□□□□□ -1.38
MBD4O95243 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
MBD4O95243 MIR223-201ENST00000385204 110 ntBASIC6.41□□□□□ -1.38
MBD4O95243 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
MBD4O95243 AL133482.1-201ENST00000415988 498 ntBASIC6.41□□□□□ -1.38
MBD4O95243 GLUD1P9-201ENST00000420997 1173 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AL356806.1-201ENST00000422524 916 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC017019.1-201ENST00000426129 261 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AL445528.1-201ENST00000426330 420 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.41□□□□□ -1.38
MBD4O95243 PSAT1P4-201ENST00000466500 526 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC005532.2-201ENST00000467154 373 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC008638.1-201ENST00000506035 866 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC006499.3-201ENST00000506077 748 ntBASIC6.41□□□□□ -1.38
MBD4O95243 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.41□□□□□ -1.38
MBD4O95243 OR4V1P-201ENST00000525394 1140 ntBASIC6.41□□□□□ -1.38
MBD4O95243 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.41□□□□□ -1.38
MBD4O95243 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.41□□□□□ -1.38
MBD4O95243 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.41□□□□□ -1.38
MBD4O95243 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.41□□□□□ -1.38
MBD4O95243 HMGB1P51-201ENST00000605166 638 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC239803.2-201ENST00000610161 430 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC126915.2-201ENST00000610957 190 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC244107.2-201ENST00000611773 76 ntBASIC6.41□□□□□ -1.38
MBD4O95243 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.41□□□□□ -1.38
MBD4O95243 RMST_5.1-201ENST00000618704 126 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.41□□□□□ -1.38
MBD4O95243 AC109780.1-201ENST00000451768 1344 ntBASIC6.41□□□□□ -1.38
MBD4O95243 AL355488.2-201ENST00000609909 2850 ntBASIC6.41□□□□□ -1.38
MBD4O95243 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MBD4O95243 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
MBD4O95243 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.41□□□□□ -1.38
MBD4O95243 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
MBD4O95243 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 RNU6-1251P-201ENST00000364502 107 ntBASIC6.4□□□□□ -1.38
MBD4O95243 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 RNU11-201ENST00000387069 134 ntBASIC6.4□□□□□ -1.38
MBD4O95243 RNA5SP105-201ENST00000391123 113 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AL358178.1-201ENST00000407698 397 ntBASIC6.4□□□□□ -1.38
MBD4O95243 RN7SKP273-201ENST00000411392 314 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AL445213.1-201ENST00000412589 747 ntBASIC6.4□□□□□ -1.38
MBD4O95243 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.4□□□□□ -1.38
MBD4O95243 AC106901.1-201ENST00000425086 698 ntBASIC6.4□□□□□ -1.38
MBD4O95243 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.4□□□□□ -1.38
MBD4O95243 ARAFP2-201ENST00000440565 559 ntBASIC6.4□□□□□ -1.38
MBD4O95243 RN7SL515P-201ENST00000463999 297 ntBASIC6.4□□□□□ -1.38
MBD4O95243 RN7SL423P-201ENST00000486202 304 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.4□□□□□ -1.38
MBD4O95243 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.4□□□□□ -1.38
MBD4O95243 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 AC016180.1-201ENST00000567945 403 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AL360012.1-201ENST00000602813 131 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AC108738.1-201ENST00000603703 237 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AC013244.1-201ENST00000604279 193 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AC009032.1-201ENST00000617574 431 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AC015660.5-201ENST00000623238 564 ntBASIC6.4□□□□□ -1.38
MBD4O95243 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.4□□□□□ -1.38
MBD4O95243 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.4□□□□□ -1.38
MBD4O95243 AC074101.1-201ENST00000637861 241 ntBASIC6.4□□□□□ -1.38
MBD4O95243 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MBD4O95243 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.4□□□□□ -1.39
MBD4O95243 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
MBD4O95243 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
MBD4O95243 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.39□□□□□ -1.39
MBD4O95243 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.39□□□□□ -1.39
MBD4O95243 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 RNU1-146P-201ENST00000364015 165 ntBASIC6.39□□□□□ -1.39
MBD4O95243 RNU1-43P-201ENST00000365052 165 ntBASIC6.39□□□□□ -1.39
MBD4O95243 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 RNU6-152P-201ENST00000384037 107 ntBASIC6.39□□□□□ -1.39
MBD4O95243 RNU6-1263P-201ENST00000384601 106 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms