Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL022322.2-201ENST00000624072 20397 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNU1-136P-201ENST00000384181 164 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 CHMP1B2P-201ENST00000399581 597 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL133388.1-201ENST00000404509 287 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC006466.1-201ENST00000438721 289 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 RN7SL808P-201ENST00000496066 299 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC130364.2-201ENST00000528639 604 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC109583.2-201ENST00000617367 129 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC090527.3-201ENST00000619041 548 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC241377.1-201ENST00000619797 406 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC099654.11-201ENST00000638857 294 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL121839.2-201ENST00000565058 6943 ntBASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC114947.2-201ENST00000565748 2125 ntBASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
TMX2-CTNND1H3BSU7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 RN7SKP103-201ENST00000363848 320 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 U3.28-201ENST00000391249 210 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 DUTP5-201ENST00000406790 469 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 TCEA1P3-201ENST00000443005 880 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 CBX1P2-201ENST00000453841 458 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 PSAT1P4-201ENST00000466500 526 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 RPL7P6-201ENST00000480903 738 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 RPS4XP20-201ENST00000505751 772 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AP001922.4-201ENST00000526967 290 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AP002884.5-201ENST00000595053 1132 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 Mico1.1-201ENST00000611698 204 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC023421.1-201ENST00000590535 1785 ntBASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TMX2-CTNND1H3BSU7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR55B1P-203ENST00000641518 2602 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms