Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 NDUFA5P11-201ENST00000567995 343 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AL353778.1-201ENST00000603149 408 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC007349.4-201ENST00000608114 532 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AL139407.1-201ENST00000613826 1175 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC010975.3-201ENST00000618727 978 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 AC144833.1-201ENST00000567953 4089 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 NXF4-202ENST00000416098 1465 ntBASIC6.58□□□□□ -1.36
CCDC66A2RUB6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC66A2RUB6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC020656.2-201ENST00000613291 5309 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 Y_RNA.169-201ENST00000363745 96 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 Y_RNA.578-201ENST00000390903 88 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC233289.1-201ENST00000403700 508 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 MIR1266-201ENST00000408125 84 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 CBX1P3-201ENST00000413296 527 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC013403.1-201ENST00000436954 263 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 EEF1A1P39-201ENST00000440791 250 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC023512.1-201ENST00000444513 499 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 MORF4-201ENST00000447135 971 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RANP2-201ENST00000456833 229 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RN7SL643P-201ENST00000471845 291 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 BET1P1-201ENST00000482276 359 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RPL5P33-201ENST00000487833 905 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC023424.1-201ENST00000496058 459 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC034244.1-201ENST00000507687 207 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC021193.1-201ENST00000511607 420 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RNA5SP230-201ENST00000517039 122 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 OR4C49P-201ENST00000563891 900 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RN7SL66P-201ENST00000582099 264 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC005332.4-201ENST00000592752 579 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC124856.1-201ENST00000600819 896 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC010620.1-201ENST00000601088 1102 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC018809.2-201ENST00000602436 3823 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC036176.3-201ENST00000602456 418 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AL358072.1-201ENST00000604156 575 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC005377.1-201ENST00000605126 456 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 RPL23AP61-201ENST00000623642 466 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 OR7E91P-202ENST00000642062 1198 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AL133268.1-201ENST00000405676 1401 ntBASIC6.57□□□□□ -1.36
CCDC66A2RUB6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCDC66A2RUB6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC66A2RUB6 AC116158.1-201ENST00000560231 2129 ntBASIC6.56□□□□□ -1.36
CCDC66A2RUB6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC66A2RUB6 MTCO1P28-201ENST00000574177 1528 ntBASIC6.56□□□□□ -1.36
CCDC66A2RUB6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC66A2RUB6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CCDC66A2RUB6 AC016583.1-201ENST00000624221 2431 ntBASIC6.56□□□□□ -1.36
CCDC66A2RUB6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC66A2RUB6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC66A2RUB6 ANKRD36P1-201ENST00000344424 659 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms