Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 EIF1P7-201ENST00000487533 337 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 RPS24P16-201ENST00000497294 392 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC090638.1-201ENST00000498296 909 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 UGT2A3P7-201ENST00000510485 734 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 SCARNA20.4-201ENST00000516969 131 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC005341.1-201ENST00000571086 708 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 MIR3614-201ENST00000581261 86 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC060766.1-201ENST00000590824 627 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AP000769.2-201ENST00000602344 396 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 CDY11P-201ENST00000447168 1651 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC021242.1-201ENST00000507315 2035 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC027279.1-201ENST00000568885 4284 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 RNA5SP487-201ENST00000410186 122 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 SRSF1P1-201ENST00000424058 520 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 NPM1P22-201ENST00000427761 952 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 RPL12P11-201ENST00000439970 501 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AL390119.1-201ENST00000440329 312 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 GAPDHP25-201ENST00000447061 1001 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 RN7SL466P-201ENST00000497546 295 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 EIF3KP3-201ENST00000514461 639 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AL671862.1-201ENST00000515851 349 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 CDC42P3-201ENST00000518493 633 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 OR11H3P-201ENST00000554547 982 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 MIR4310-201ENST00000582950 57 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 MIR8080-201ENST00000622224 89 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 AC135068.5-201ENST00000624197 983 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 RBPJP2-201ENST00000618187 1444 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 CDC27P2-201ENST00000425026 1922 ntBASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DRB4X5D2U9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 AL022393.1-201ENST00000625142 1677 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 AC083843.3-201ENST00000623679 2186 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 OR55B1P-203ENST00000641518 2602 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 Z83820.1-201ENST00000456978 1499 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 AC114947.2-201ENST00000565748 2125 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 AC079298.1-201ENST00000625026 1619 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 OR4G1P-202ENST00000641173 1788 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 MIR323A-201ENST00000362199 86 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 RNA5SP234-201ENST00000363916 119 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 MIR143-201ENST00000385300 106 ntBASIC4□□□□□ -1.77
HLA-DRB4X5D2U9 AC005522.1-201ENST00000395416 346 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms