Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 CR383656.5-201ENST00000547616 1340 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC093849.1-201ENST00000563631 2209 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 DUTP5-201ENST00000406790 469 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 RNA5SP487-201ENST00000410186 122 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 RPL12P18-201ENST00000437175 325 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 RPS11P7-201ENST00000442125 465 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 TAAR4P-201ENST00000454843 1039 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 RPL7P6-201ENST00000480903 738 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC008410.1-201ENST00000483777 339 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC021106.1-201ENST00000509020 1058 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 YWHABP2-201ENST00000540201 713 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 OR11H3P-201ENST00000554547 982 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 MIR3691-201ENST00000578066 90 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC006363.1-201ENST00000603806 463 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AL445222.1-201ENST00000607259 628 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC135068.5-201ENST00000624197 983 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC079097.1-201ENST00000512187 1399 ntBASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP2Q9UDT6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 MTCO1P46-201ENST00000451639 1491 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 U8.4-201ENST00000363626 134 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 SNORA74A-201ENST00000364089 198 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 SNORA58B-201ENST00000364259 136 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 HSPA8P15-201ENST00000401676 786 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC007394.1-201ENST00000421941 531 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 GAPDHP58-201ENST00000438477 1006 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 GAPDHP14-201ENST00000450472 937 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC058823.1-201ENST00000485315 474 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 RN7SL808P-201ENST00000496066 299 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC111000.5-201ENST00000506559 1178 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC079064.1-201ENST00000528365 362 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 MIR7853-201ENST00000584820 132 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AL139407.1-201ENST00000613826 1175 ntBASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CLIP2Q9UDT6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 HSPA8P14-201ENST00000552265 1805 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms