Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AC105031.1-201ENST00000518550 476 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 SETP1-201ENST00000556014 845 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 MIR4505-201ENST00000582238 73 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AC100767.2-201ENST00000604840 693 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 BNIP3P41-202ENST00000616656 861 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AC037198.3-201ENST00000616754 526 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC023490.2-201ENST00000359859 470 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 RNA5SP335-201ENST00000363817 110 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 RNA5SP90-201ENST00000364801 99 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 OR8V1P-201ENST00000395193 873 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC073909.1-201ENST00000447112 999 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 RN7SL51P-201ENST00000468230 285 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 HMGB1P40-201ENST00000525121 540 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC092747.4-201ENST00000620519 1861 ntBASIC4.89□□□□□ -1.63
VAPAQ9P0L0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.89□□□□□ -1.63
VAPAQ9P0L0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 RNA5SP319-201ENST00000362768 119 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 NPM1P40-201ENST00000412758 733 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AL139148.1-201ENST00000427122 680 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 MRPL35P2-201ENST00000448009 511 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC104849.1-201ENST00000462623 405 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 SNORD46.2-201ENST00000516021 102 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 KCTD9P6-201ENST00000522306 950 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AP000859.1-201ENST00000525536 307 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC127381.1-201ENST00000555979 939 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 RPL10P14-201ENST00000565265 298 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 MIR4472-2-201ENST00000582069 67 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AL499605.1-201ENST00000604628 403 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AL451049.1-201ENST00000608672 497 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 AC015914.2-201ENST00000618167 288 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms