Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NXF3Q9H4D5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NXF3Q9H4D5 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NXF3Q9H4D5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NXF3Q9H4D5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC016745.2-201ENST00000608834 3443 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RNA5SP123-201ENST00000363244 119 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RN7SKP145-201ENST00000363291 303 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RN7SKP114-201ENST00000410327 279 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 DDX39BP1-205ENST00000422507 192 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC009784.1-201ENST00000426484 460 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RPL34P20-201ENST00000442771 351 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC023271.1-201ENST00000445936 1090 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RN7SL197P-201ENST00000466981 299 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RN7SL189P-201ENST00000468631 289 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC097486.1-201ENST00000515331 210 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 OR5AZ1P-201ENST00000527448 943 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 MIR4691-201ENST00000583764 85 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AL445528.2-201ENST00000620582 470 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.62□□□□□ -1.51
NXF3Q9H4D5 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NXF3Q9H4D5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 RNA5SP453-201ENST00000362503 119 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 RN7SKP153-201ENST00000365026 316 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 CHMP1B2P-201ENST00000399581 597 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 GJA6P-201ENST00000415117 1042 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC090018.1-201ENST00000434369 367 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 HIGD1AP8-201ENST00000453927 274 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 SNRPCP3-201ENST00000474888 476 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 HMGN2P25-201ENST00000486956 268 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 RN7SL814P-201ENST00000487715 300 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC022133.1-201ENST00000490961 571 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 RPS12P31-201ENST00000491419 398 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AP001922.4-201ENST00000526967 290 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 OR5D15P-201ENST00000531671 942 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 NPM1P5-201ENST00000557228 838 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 AC007786.3-201ENST00000615154 596 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.61□□□□□ -1.51
NXF3Q9H4D5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.61□□□□□ -1.51
NXF3Q9H4D5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 NXF4-202ENST00000416098 1465 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 SAMM50P1-201ENST00000455403 1399 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC103591.2-201ENST00000265259 766 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 SNORA51.8-201ENST00000384234 132 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 MIR585-201ENST00000384887 94 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AL133270.1-201ENST00000402635 279 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AL158827.1-201ENST00000416300 391 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 BX276092.6-201ENST00000430476 250 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 TRY2P-201ENST00000448860 689 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 NDUFA5P8-201ENST00000449019 346 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms