Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 AC020915.5-201ENST00000596836 964 ntBASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 HIRAP1-201ENST00000605318 787 ntBASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 AC104260.2-201ENST00000623551 3497 ntBASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 AC007938.2-201ENST00000604666 2634 ntBASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 MAPK10-320ENST00000641462 6696 ntBASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHRDL1Q9BU40 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AL451142.2-201ENST00000429076 2090 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 RNA5SP477-201ENST00000362639 119 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 RNA5SP500-201ENST00000364486 119 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 RNU1-136P-201ENST00000384181 164 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 EIF4A1P3-201ENST00000411521 244 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 MRPL53P1-201ENST00000414323 319 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AL133482.1-201ENST00000415988 498 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC019205.1-201ENST00000421830 730 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 NAP1L4P2-201ENST00000425958 899 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC126120.1-201ENST00000431082 470 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 GAPDHP48-201ENST00000436626 961 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 NDUFS5P5-201ENST00000437256 321 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 EIF5AP4-201ENST00000441206 465 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 OR7E116P-201ENST00000448529 957 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 METTL15P1-201ENST00000481421 1045 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC069304.1-201ENST00000491593 704 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 PFN1P8-201ENST00000497012 543 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC108471.1-201ENST00000513977 287 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 Y_RNA.667-201ENST00000516212 107 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 RNA5SP438-201ENST00000516561 112 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 MTCYBP19-201ENST00000517463 1124 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 OR4A17P-201ENST00000526032 904 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 OR8A2P-201ENST00000528631 952 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 EIF1AXP2-201ENST00000555940 413 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 HMGB1P51-201ENST00000605166 638 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AL008729.2-201ENST00000606393 473 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC116447.1-201ENST00000613153 453 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC021766.1-201ENST00000624404 741 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 PDZK1P1-202ENST00000425209 1350 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 TCP1P3-201ENST00000414406 1498 ntBASIC4.47□□□□□ -1.69
CHRDL1Q9BU40 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms