Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 CR383656.14-201ENST00000551951 406 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC110792.3-201ENST00000595906 1614 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 CR589904.2-201ENST00000612533 440 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AL118522.2-201ENST00000616045 615 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 OR5AC4P-202ENST00000642086 985 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 U3.2-201ENST00000362981 210 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 RNA5SP335-201ENST00000363817 110 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 GNG5P2-201ENST00000372054 207 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AL357078.2-201ENST00000416486 427 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC015977.1-201ENST00000418887 292 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 RNU1-88P-201ENST00000459274 128 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AL035690.1-201ENST00000490892 383 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 RPEP1-201ENST00000504507 658 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC021087.2-201ENST00000504656 1203 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC098483.2-201ENST00000603158 454 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AC009163.6-201ENST00000612367 342 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 AL512506.1-201ENST00000613918 449 ntBASIC6.11□□□□□ -1.43
HERC6Q8IVU3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HERC6Q8IVU3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC015799.1-201ENST00000622996 3122 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AL109941.1-201ENST00000401925 229 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 RPS26P13-201ENST00000419030 330 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 MTCYBP7-201ENST00000419540 1134 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 SETP9-201ENST00000423837 832 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 MTND4LP13-201ENST00000425022 298 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AL513321.1-201ENST00000441175 761 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 REG1CP-206ENST00000447469 496 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AL035090.1-201ENST00000454835 332 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 snoU13.29-201ENST00000459370 104 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 RN7SL447P-201ENST00000494711 245 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 CR383656.6-201ENST00000550518 394 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 OR11J2P-201ENST00000555298 907 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 ELOCP28-201ENST00000590044 317 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC006249.1-201ENST00000621223 471 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AP000550.3-201ENST00000637734 379 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AL121768.1-201ENST00000613917 2544 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms