Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC244107.2-201ENST00000611773 76 ntBASIC6.35□□□□□ -1.39
CTR9Q6PD62 AL139407.1-201ENST00000613826 1175 ntBASIC6.35□□□□□ -1.39
CTR9Q6PD62 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTR9Q6PD62 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTR9Q6PD62 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTR9Q6PD62 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTR9Q6PD62 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CTR9Q6PD62 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.35□□□□□ -1.39
CTR9Q6PD62 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.35□□□□□ -1.39
CTR9Q6PD62 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CTR9Q6PD62 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.35□□□□□ -1.39
CTR9Q6PD62 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTR9Q6PD62 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTR9Q6PD62 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTR9Q6PD62 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 RNU1-146P-201ENST00000364015 165 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTR9Q6PD62 AC002524.1-201ENST00000411687 547 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 LYPLA1P1-201ENST00000434514 622 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 BX284632.1-201ENST00000478218 541 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 RN7SL423P-201ENST00000486202 304 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 COX6B1P2-201ENST00000489624 230 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 HAUS8P1-201ENST00000549005 542 ntBASIC6.34□□□□□ -1.39
CTR9Q6PD62 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTR9Q6PD62 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTR9Q6PD62 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CTR9Q6PD62 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.34□□□□□ -1.4
CTR9Q6PD62 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CTR9Q6PD62 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 AC092681.1-201ENST00000297369 291 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 RPL23P2-201ENST00000320371 421 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 RNU6-249P-201ENST00000363016 102 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 MIR105-2-201ENST00000385083 81 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 RNA5SP296-201ENST00000410523 111 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 RPS4XP20-201ENST00000505751 772 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 OR4A46P-201ENST00000527255 933 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 OR10G5P-201ENST00000532733 358 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 AC125612.1-201ENST00000547580 377 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 AC051619.2-201ENST00000559063 397 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 AL122125.1-201ENST00000616999 600 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 uc_338.7-201ENST00000621834 124 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 AP003400.3-201ENST00000624904 346 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 SAMMSON-227ENST00000642114 1199 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 AL034549.2-201ENST00000618285 3373 ntBASIC6.33□□□□□ -1.4
CTR9Q6PD62 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTR9Q6PD62 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CTR9Q6PD62 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTR9Q6PD62 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTR9Q6PD62 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 RNU1-19P-201ENST00000363306 165 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 U8.4-201ENST00000363626 134 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 AL133482.1-201ENST00000415988 498 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 RPS11P7-201ENST00000442125 465 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms