Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC092692.1-201ENST00000623625 2595 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL355834.1-201ENST00000556602 3965 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 RNU1-49P-201ENST00000363468 159 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 RNA5SP284-201ENST00000384547 118 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC087752.1-201ENST00000391360 558 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL096800.1-201ENST00000405326 893 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 XKRYP1-201ENST00000423438 492 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 XKRYP2-201ENST00000432915 492 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 OR3D1P-201ENST00000438288 955 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 RPL31P44-201ENST00000447680 377 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 RNA5SP438-201ENST00000516561 112 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 RNA5SP434-201ENST00000516647 121 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AP001858.2-201ENST00000536213 601 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC090651.1-201ENST00000567865 634 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL357094.1-201ENST00000603845 844 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL021368.3-201ENST00000607119 578 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AP000550.3-201ENST00000637734 379 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 LINC01808-202ENST00000641680 1116 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL033543.1-201ENST00000623440 13454 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 MTCO1P11-201ENST00000429111 1528 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 ENSAP3-201ENST00000312710 333 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 RNU6-906P-201ENST00000384700 70 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 RPL23AP17-201ENST00000401064 499 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AL121835.1-201ENST00000404250 354 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 UBE2V1P14-201ENST00000415815 558 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC015977.1-201ENST00000418887 292 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 RPL7P29-201ENST00000437151 728 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 MORF4-201ENST00000447135 971 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC110749.1-201ENST00000462007 357 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 METTL15P1-201ENST00000481421 1045 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC114728.1-201ENST00000488289 483 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AL035690.1-201ENST00000490892 383 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC008945.1-201ENST00000505144 499 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC010343.2-201ENST00000510162 224 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC114781.3-201ENST00000512083 142 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AP002373.2-201ENST00000541631 1060 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 POLR2KP1-201ENST00000553226 168 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC090236.2-201ENST00000587933 1101 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC090525.3-201ENST00000605601 189 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC108673.3-201ENST00000609183 335 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC109309.2-201ENST00000612597 332 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AC009464.1-201ENST00000615731 469 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AP003497.2-201ENST00000624220 967 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 PSG10P-201ENST00000501199 1500 ntBASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms