Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 NEPNP-201ENST00000404786 1371 ntBASIC5.45□□□□□ -1.54
RAE1P78406 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 AL159987.1-201ENST00000347911 293 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.45□□□□□ -1.54
RAE1P78406 RNA5SP326-201ENST00000363209 110 ntBASIC5.45□□□□□ -1.54
RAE1P78406 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RAE1P78406 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 AC093084.1-201ENST00000424233 687 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC126120.1-201ENST00000431082 470 ntBASIC5.45□□□□□ -1.54
RAE1P78406 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 AC099670.2-201ENST00000435130 321 ntBASIC5.45□□□□□ -1.54
RAE1P78406 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 NANOGP9-201ENST00000439890 892 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC245047.2-201ENST00000441060 530 ntBASIC5.45□□□□□ -1.54
RAE1P78406 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.45□□□□□ -1.54
RAE1P78406 HMGB1P5-202ENST00000451497 985 ntBASIC5.45□□□□□ -1.54
RAE1P78406 RPS17P15-201ENST00000475609 349 ntBASIC5.45□□□□□ -1.54
RAE1P78406 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 AC009120.1-201ENST00000493458 473 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 BOLA3P3-201ENST00000505182 232 ntBASIC5.45□□□□□ -1.54
RAE1P78406 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 HMGN2P36-201ENST00000529541 409 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.45□□□□□ -1.54
RAE1P78406 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.45□□□□□ -1.54
RAE1P78406 AP003717.3-201ENST00000544832 1180 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC068305.2-201ENST00000550567 1205 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC023310.2-201ENST00000553844 547 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.45□□□□□ -1.54
RAE1P78406 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.45□□□□□ -1.54
RAE1P78406 AC025811.1-201ENST00000604312 472 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC025175.1-201ENST00000606482 759 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.45□□□□□ -1.54
RAE1P78406 AC008115.4-201ENST00000619780 775 ntBASIC5.45□□□□□ -1.54
RAE1P78406 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 AC073592.6-201ENST00000624271 415 ntBASIC5.45□□□□□ -1.54
RAE1P78406 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.45□□□□□ -1.54
RAE1P78406 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 CR788268.1-201ENST00000603931 1809 ntBASIC5.45□□□□□ -1.54
RAE1P78406 IFIT1P1-201ENST00000400497 1449 ntBASIC5.45□□□□□ -1.54
RAE1P78406 CAP1P2-201ENST00000417455 1409 ntBASIC5.45□□□□□ -1.54
RAE1P78406 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 AC116158.1-201ENST00000560231 2129 ntBASIC5.45□□□□□ -1.54
RAE1P78406 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.45□□□□□ -1.54
RAE1P78406 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
RAE1P78406 AC006206.1-201ENST00000544842 3387 ntBASIC5.45□□□□□ -1.54
RAE1P78406 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAE1P78406 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
RAE1P78406 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.44□□□□□ -1.54
RAE1P78406 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAE1P78406 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RAE1P78406 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RAE1P78406 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RAE1P78406 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.44□□□□□ -1.54
RAE1P78406 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RAE1P78406 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RAE1P78406 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
RAE1P78406 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAE1P78406 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAE1P78406 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAE1P78406 AC004386.1-201ENST00000393214 761 ntBASIC5.44□□□□□ -1.54
RAE1P78406 AP002530.1-201ENST00000405705 684 ntBASIC5.44□□□□□ -1.54
RAE1P78406 MIR1203-201ENST00000408812 85 ntBASIC5.44□□□□□ -1.54
RAE1P78406 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.44□□□□□ -1.54
RAE1P78406 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.44□□□□□ -1.54
RAE1P78406 AL354868.1-201ENST00000417077 482 ntBASIC5.44□□□□□ -1.54
RAE1P78406 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.44□□□□□ -1.54
RAE1P78406 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.44□□□□□ -1.54
RAE1P78406 OR5W1P-201ENST00000423705 938 ntBASIC5.44□□□□□ -1.54
RAE1P78406 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms