Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NIFKP3-201ENST00000417799 865 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 RPL34P3-201ENST00000421454 338 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 NAP1L4P2-201ENST00000425958 899 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 OR7E116P-201ENST00000448529 957 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 MTND2P6-201ENST00000455337 1030 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 MTND6P32-201ENST00000457611 483 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 RN7SL273P-201ENST00000481561 299 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 CAB39P1-201ENST00000502277 460 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 SNORA43.3-201ENST00000517240 103 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 MRPS16P1-201ENST00000523462 412 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 MTND5P21-201ENST00000531961 522 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AL121594.2-201ENST00000541658 472 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.16□□□□□ -1.58
CLDN20P56880 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 BNIP3P31-201ENST00000604515 566 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC005021.1-201ENST00000608730 355 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AC245389.2-201ENST00000616023 576 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AC242843.1-201ENST00000618702 573 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AC022306.3-201ENST00000619930 550 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 AC011933.2-201ENST00000578539 2790 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AL603750.1-201ENST00000624216 1717 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AL137141.1-201ENST00000624622 4836 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.15□□□□□ -1.58
CLDN20P56880 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.15□□□□□ -1.58
CLDN20P56880 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLDN20P56880 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLDN20P56880 AC116158.1-201ENST00000560231 2129 ntBASIC5.15□□□□□ -1.58
CLDN20P56880 SRRM1P3-201ENST00000426911 2678 ntBASIC5.15□□□□□ -1.58
CLDN20P56880 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.15□□□□□ -1.58
CLDN20P56880 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CLDN20P56880 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.15□□□□□ -1.58
CLDN20P56880 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLDN20P56880 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.15□□□□□ -1.59
CLDN20P56880 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.15□□□□□ -1.59
CLDN20P56880 SNORA63.3-201ENST00000362682 132 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 RN7SKP269-201ENST00000365545 319 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 RNU6-650P-201ENST00000365658 111 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 GCNT6-201ENST00000379591 934 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 GSTA12P-201ENST00000402398 508 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 RNA5SP178-201ENST00000410380 128 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN20P56880 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 RPL12P18-201ENST00000437175 325 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CLDN20P56880 AL391987.1-201ENST00000441025 200 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AP000281.1-201ENST00000444036 316 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 LRRC37A14P-201ENST00000452297 462 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 YWHAEP1-201ENST00000453697 763 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CLDN20P56880 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN20P56880 RN7SL570P-201ENST00000484405 292 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 MTCO2P9-201ENST00000503214 694 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AC109481.1-201ENST00000509173 282 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN20P56880 RNU6-615P-201ENST00000516065 106 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 OSBPL9P3-201ENST00000534523 595 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.15□□□□□ -1.59
CLDN20P56880 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.15□□□□□ -1.59
CLDN20P56880 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 NOP56P3-201ENST00000549457 385 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 LSM3P2-201ENST00000551246 273 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 AC010547.6-201ENST00000571789 193 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN20P56880 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.15□□□□□ -1.59
CLDN20P56880 AC063977.5-201ENST00000601044 974 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AC006363.1-201ENST00000603806 463 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AC018645.2-201ENST00000609151 472 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AC110792.4-201ENST00000609843 298 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 AP000943.4-201ENST00000622912 357 ntBASIC5.15□□□□□ -1.59
CLDN20P56880 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN20P56880 AC010872.1-201ENST00000624225 675 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms