Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC083899.1-201ENST00000454465 3819 ntBASIC5.87□□□□□ -1.47
VCPP55072 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 AC006206.1-201ENST00000544842 3387 ntBASIC5.86□□□□□ -1.47
VCPP55072 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 OR4F13P-202ENST00000560066 2054 ntBASIC5.86□□□□□ -1.47
VCPP55072 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.86□□□□□ -1.47
VCPP55072 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 AL390774.1-201ENST00000411924 246 ntBASIC5.86□□□□□ -1.47
VCPP55072 NENFP1-201ENST00000419476 466 ntBASIC5.86□□□□□ -1.47
VCPP55072 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.86□□□□□ -1.47
VCPP55072 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.86□□□□□ -1.47
VCPP55072 VTI1BP4-201ENST00000427516 527 ntBASIC5.86□□□□□ -1.47
VCPP55072 RPS27AP6-201ENST00000427962 448 ntBASIC5.86□□□□□ -1.47
VCPP55072 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.86□□□□□ -1.47
VCPP55072 TMEM183AP1-205ENST00000432739 290 ntBASIC5.86□□□□□ -1.47
VCPP55072 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.86□□□□□ -1.47
VCPP55072 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 NPM1P28-201ENST00000492269 840 ntBASIC5.86□□□□□ -1.47
VCPP55072 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.86□□□□□ -1.47
VCPP55072 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.86□□□□□ -1.47
VCPP55072 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.86□□□□□ -1.47
VCPP55072 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 AC006116.3-201ENST00000592968 361 ntBASIC5.86□□□□□ -1.47
VCPP55072 AC002069.2-201ENST00000603580 883 ntBASIC5.86□□□□□ -1.47
VCPP55072 AC087283.1-201ENST00000604029 1074 ntBASIC5.86□□□□□ -1.47
VCPP55072 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 AC090607.5-201ENST00000615692 224 ntBASIC5.86□□□□□ -1.47
VCPP55072 AC132068.1-201ENST00000623805 459 ntBASIC5.86□□□□□ -1.47
VCPP55072 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.86□□□□□ -1.47
VCPP55072 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VCPP55072 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VCPP55072 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 AC026523.2-201ENST00000625039 7739 ntBASIC5.86□□□□□ -1.47
VCPP55072 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VCPP55072 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VCPP55072 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
VCPP55072 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VCPP55072 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 MAPK10-338ENST00000641647 3362 ntBASIC5.85□□□□□ -1.47
VCPP55072 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.85□□□□□ -1.47
VCPP55072 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
VCPP55072 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VCPP55072 AC010132.2-201ENST00000295493 1043 ntBASIC5.85□□□□□ -1.47
VCPP55072 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VCPP55072 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.85□□□□□ -1.47
VCPP55072 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 AC006335.2-201ENST00000437993 330 ntBASIC5.85□□□□□ -1.47
VCPP55072 AL450023.1-201ENST00000450868 751 ntBASIC5.85□□□□□ -1.47
VCPP55072 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 AC092905.1-201ENST00000467527 949 ntBASIC5.85□□□□□ -1.47
VCPP55072 ATP5LP5-201ENST00000483050 299 ntBASIC5.85□□□□□ -1.47
VCPP55072 AC105233.1-201ENST00000498840 781 ntBASIC5.85□□□□□ -1.47
VCPP55072 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
VCPP55072 AC020937.1-201ENST00000519677 1013 ntBASIC5.85□□□□□ -1.47
VCPP55072 OR4A17P-201ENST00000526032 904 ntBASIC5.85□□□□□ -1.47
VCPP55072 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.85□□□□□ -1.47
VCPP55072 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.85□□□□□ -1.47
VCPP55072 Z95327.3-201ENST00000610385 572 ntBASIC5.85□□□□□ -1.47
VCPP55072 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VCPP55072 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 AC104964.3-201ENST00000606115 2860 ntBASIC5.85□□□□□ -1.47
VCPP55072 HSPA8P18-201ENST00000439846 1928 ntBASIC5.85□□□□□ -1.47
VCPP55072 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
VCPP55072 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 PWAR1-201ENST00000624188 2414 ntBASIC5.85□□□□□ -1.47
VCPP55072 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VCPP55072 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VCPP55072 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VCPP55072 MTCO1P46-201ENST00000451639 1491 ntBASIC5.84□□□□□ -1.47
VCPP55072 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VCPP55072 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VCPP55072 RN7SKP28-201ENST00000364770 305 ntBASIC5.84□□□□□ -1.47
VCPP55072 MIR23A-201ENST00000385245 73 ntBASIC5.84□□□□□ -1.47
VCPP55072 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.84□□□□□ -1.47
VCPP55072 AL360081.1-201ENST00000428299 555 ntBASIC5.84□□□□□ -1.47
VCPP55072 C4BPAP2-201ENST00000428434 478 ntBASIC5.84□□□□□ -1.47
VCPP55072 NPM1P48-201ENST00000436002 853 ntBASIC5.84□□□□□ -1.47
VCPP55072 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.84□□□□□ -1.47
VCPP55072 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.84□□□□□ -1.47
VCPP55072 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms