Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SMARCA4P51532 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
SMARCA4P51532 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
SMARCA4P51532 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SMARCA4P51532 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SMARCA4P51532 MAPK10-270ENST00000641102 3538 ntBASIC8.96□□□□□ -0.97
SMARCA4P51532 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
SMARCA4P51532 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.98
SMARCA4P51532 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.96□□□□□ -0.98
SMARCA4P51532 AC008782.1-201ENST00000603386 430 ntBASIC8.96□□□□□ -0.98
SMARCA4P51532 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.96□□□□□ -0.98
SMARCA4P51532 AC010632.3-201ENST00000611377 369 ntBASIC8.96□□□□□ -0.98
SMARCA4P51532 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.96□□□□□ -0.98
SMARCA4P51532 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SMARCA4P51532 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SMARCA4P51532 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.96□□□□□ -0.98
SMARCA4P51532 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 OR56B2P-202ENST00000641377 2453 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.95□□□□□ -0.98
SMARCA4P51532 AC023141.6-201ENST00000429418 337 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 AC090804.1-201ENST00000448870 490 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 OR2A3P-201ENST00000493774 953 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA4P51532 AP001804.1-201ENST00000526868 919 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 AC079064.1-201ENST00000528365 362 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC8.95□□□□□ -0.98
SMARCA4P51532 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA4P51532 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA4P51532 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA4P51532 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA4P51532 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.95□□□□□ -0.98
SMARCA4P51532 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
SMARCA4P51532 AL117378.2-201ENST00000622916 1337 ntBASIC8.95□□□□□ -0.98
SMARCA4P51532 AL645608.4-201ENST00000423619 154 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AC017019.1-201ENST00000426129 261 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.94□□□□□ -0.98
SMARCA4P51532 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.94□□□□□ -0.98
SMARCA4P51532 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.94□□□□□ -0.98
SMARCA4P51532 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.94□□□□□ -0.98
SMARCA4P51532 AP001357.1-201ENST00000586304 1053 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AC079414.3-201ENST00000612986 1090 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 MIR6830-201ENST00000636015 70 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 ECM1P2-201ENST00000503354 1577 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
SMARCA4P51532 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA4P51532 AC125257.1-201ENST00000560400 2930 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AC100871.1-201ENST00000507871 1456 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA4P51532 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
SMARCA4P51532 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA4P51532 RPEP3-201ENST00000425462 676 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AL732292.1-201ENST00000426692 226 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA4P51532 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.94□□□□□ -0.98
SMARCA4P51532 BX679664.2-201ENST00000439282 283 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 PSAT1P4-201ENST00000466500 526 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.94□□□□□ -0.98
SMARCA4P51532 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.94□□□□□ -0.98
SMARCA4P51532 AC068831.4-201ENST00000556118 109 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.94□□□□□ -0.98
SMARCA4P51532 AL356218.2-201ENST00000605264 187 ntBASIC8.94□□□□□ -0.98
SMARCA4P51532 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.94□□□□□ -0.98
SMARCA4P51532 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA4P51532 AC009951.1-201ENST00000623674 2614 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SMARCA4P51532 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.93□□□□□ -0.98
SMARCA4P51532 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
SMARCA4P51532 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.93□□□□□ -0.98
SMARCA4P51532 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.93□□□□□ -0.98
SMARCA4P51532 AL590399.2-201ENST00000427536 309 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 KCTD10P1-201ENST00000434203 625 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.93□□□□□ -0.98
SMARCA4P51532 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.93□□□□□ -0.98
SMARCA4P51532 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.93□□□□□ -0.98
SMARCA4P51532 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 AC019206.1-201ENST00000621938 425 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SMARCA4P51532 MAPK10-371ENST00000641952 5209 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.93□□□□□ -0.98
SMARCA4P51532 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA4P51532 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SMARCA4P51532 AL355488.2-201ENST00000609909 2850 ntBASIC8.93□□□□□ -0.98
SMARCA4P51532 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms