Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 AMZ2P2-201ENST00000406819 1057 ntBASIC6.83□□□□□ -1.32
MRE11P49959 SPTLC1P2-201ENST00000407089 121 ntBASIC6.83□□□□□ -1.32
MRE11P49959 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.83□□□□□ -1.32
MRE11P49959 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.83□□□□□ -1.32
MRE11P49959 MYL6P5-201ENST00000412707 459 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.83□□□□□ -1.32
MRE11P49959 AL355433.1-201ENST00000422804 300 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC092648.1-201ENST00000425870 423 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.83□□□□□ -1.32
MRE11P49959 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.83□□□□□ -1.32
MRE11P49959 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.83□□□□□ -1.32
MRE11P49959 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.83□□□□□ -1.32
MRE11P49959 AL009048.1-201ENST00000450437 298 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.83□□□□□ -1.32
MRE11P49959 ACA64.4-201ENST00000459070 127 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.83□□□□□ -1.32
MRE11P49959 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 OR9N1P-201ENST00000491296 333 ntBASIC6.83□□□□□ -1.32
MRE11P49959 MTCYBP35-201ENST00000503630 1137 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 AC093870.1-201ENST00000506837 213 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.83□□□□□ -1.32
MRE11P49959 AC108157.1-201ENST00000510511 539 ntBASIC6.83□□□□□ -1.32
MRE11P49959 NPM1P21-201ENST00000513394 762 ntBASIC6.83□□□□□ -1.32
MRE11P49959 ZNF519P4-201ENST00000514008 125 ntBASIC6.83□□□□□ -1.32
MRE11P49959 RNA5SP271-201ENST00000516700 88 ntBASIC6.83□□□□□ -1.32
MRE11P49959 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.83□□□□□ -1.32
MRE11P49959 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.83□□□□□ -1.32
MRE11P49959 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.83□□□□□ -1.32
MRE11P49959 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.83□□□□□ -1.32
MRE11P49959 AC005332.4-201ENST00000592752 579 ntBASIC6.83□□□□□ -1.32
MRE11P49959 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 AC073046.2-201ENST00000604756 527 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AL451086.1-201ENST00000605596 223 ntBASIC6.83□□□□□ -1.32
MRE11P49959 AC004801.6-201ENST00000616571 978 ntBASIC6.83□□□□□ -1.32
MRE11P49959 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MRE11P49959 AL590396.4-201ENST00000636779 956 ntBASIC6.83□□□□□ -1.32
MRE11P49959 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
MRE11P49959 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 AC007342.5-201ENST00000571340 2142 ntBASIC6.82□□□□□ -1.32
MRE11P49959 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 PPIAP24-201ENST00000328558 471 ntBASIC6.82□□□□□ -1.32
MRE11P49959 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.82□□□□□ -1.32
MRE11P49959 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 RNU6-40P-201ENST00000384254 107 ntBASIC6.82□□□□□ -1.32
MRE11P49959 MTCO2P31-201ENST00000402702 684 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AC005005.2-201ENST00000420779 380 ntBASIC6.82□□□□□ -1.32
MRE11P49959 MTND4P24-201ENST00000424002 397 ntBASIC6.82□□□□□ -1.32
MRE11P49959 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 MORF4L1P7-201ENST00000426038 703 ntBASIC6.82□□□□□ -1.32
MRE11P49959 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.82□□□□□ -1.32
MRE11P49959 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.82□□□□□ -1.32
MRE11P49959 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.82□□□□□ -1.32
MRE11P49959 AC007000.2-201ENST00000442564 487 ntBASIC6.82□□□□□ -1.32
MRE11P49959 RPL6P30-201ENST00000443382 862 ntBASIC6.82□□□□□ -1.32
MRE11P49959 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 GAPDHP23-201ENST00000444823 993 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.82□□□□□ -1.32
MRE11P49959 NPM1P17-201ENST00000479221 602 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 AC093270.2-201ENST00000486157 792 ntBASIC6.82□□□□□ -1.32
MRE11P49959 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.82□□□□□ -1.32
MRE11P49959 OR5M14P-201ENST00000506803 618 ntBASIC6.82□□□□□ -1.32
MRE11P49959 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.82□□□□□ -1.32
MRE11P49959 AC112673.1-201ENST00000513168 575 ntBASIC6.82□□□□□ -1.32
MRE11P49959 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.82□□□□□ -1.32
MRE11P49959 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 OSBPL9P3-201ENST00000534523 595 ntBASIC6.82□□□□□ -1.32
MRE11P49959 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 AC090424.1-201ENST00000535243 736 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.82□□□□□ -1.32
MRE11P49959 MIR4509-3-201ENST00000578671 94 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.82□□□□□ -1.32
MRE11P49959 MIR4509-2-201ENST00000583920 94 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AC234772.3-201ENST00000602277 528 ntBASIC6.82□□□□□ -1.32
MRE11P49959 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 AC079395.3-201ENST00000615161 484 ntBASIC6.82□□□□□ -1.32
MRE11P49959 MIR4509-1-201ENST00000618224 94 ntBASIC6.82□□□□□ -1.32
MRE11P49959 AL355493.4-201ENST00000618530 292 ntBASIC6.82□□□□□ -1.32
MRE11P49959 MIR7854-201ENST00000620068 65 ntBASIC6.82□□□□□ -1.32
MRE11P49959 LINC02495-203ENST00000636704 242 ntBASIC6.82□□□□□ -1.32
MRE11P49959 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MRE11P49959 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.82□□□□□ -1.32
MRE11P49959 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms