Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNA5SP284-201ENST00000384547 118 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 SNORA11.5-201ENST00000408163 128 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.08□□□□□ -1.6
APOBEC1P41238 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.08□□□□□ -1.6
APOBEC1P41238 RIMKLBP2-201ENST00000424737 654 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC002069.1-201ENST00000429649 1159 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.08□□□□□ -1.6
APOBEC1P41238 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
APOBEC1P41238 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 RPL5P13-201ENST00000462840 709 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 RN7SL188P-201ENST00000469842 285 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 RN7SL205P-201ENST00000490174 284 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.08□□□□□ -1.6
APOBEC1P41238 RPEP1-201ENST00000504507 658 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC022826.1-201ENST00000519383 805 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.08□□□□□ -1.6
APOBEC1P41238 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.08□□□□□ -1.6
APOBEC1P41238 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.08□□□□□ -1.6
APOBEC1P41238 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC025918.2-201ENST00000558683 763 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.08□□□□□ -1.6
APOBEC1P41238 SNORD39.2-201ENST00000579995 76 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC133794.1-201ENST00000602731 914 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC097504.2-201ENST00000608088 454 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 AC019131.2-201ENST00000609071 870 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 MIR6861-201ENST00000618657 64 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.08□□□□□ -1.6
APOBEC1P41238 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC114774.1-201ENST00000507410 1770 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.08□□□□□ -1.6
APOBEC1P41238 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.08□□□□□ -1.6
APOBEC1P41238 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
APOBEC1P41238 AL360270.2-201ENST00000562952 5985 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
APOBEC1P41238 AC091305.2-201ENST00000624049 1576 ntBASIC5.08□□□□□ -1.6
APOBEC1P41238 HSPA8P19-201ENST00000505359 1517 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.07□□□□□ -1.6
APOBEC1P41238 ZNF90P1-201ENST00000480493 1951 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
APOBEC1P41238 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 SRRM1P3-201ENST00000426911 2678 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 RN7SKP292-201ENST00000365522 317 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 RNU6-31P-201ENST00000384388 108 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 MIR551A-201ENST00000385042 96 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 TATDN1P1-201ENST00000414123 891 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AL662874.1-201ENST00000426065 230 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 MRPL50P1-201ENST00000431951 384 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 AC006335.2-201ENST00000437993 330 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.07□□□□□ -1.6
APOBEC1P41238 LINC02210-201ENST00000444561 288 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.07□□□□□ -1.6
APOBEC1P41238 FCF1P6-201ENST00000456841 595 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 UBFD1P1-201ENST00000473259 814 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOBEC1P41238 AC116562.1-201ENST00000485355 781 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AC010374.2-201ENST00000512933 535 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 NRBF2P4-201ENST00000520874 850 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 AP004609.2-201ENST00000532177 190 ntBASIC5.07□□□□□ -1.6
APOBEC1P41238 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.07□□□□□ -1.6
APOBEC1P41238 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.07□□□□□ -1.6
APOBEC1P41238 AC027243.2-201ENST00000602530 724 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms