Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 AC007842.1-201ENST00000597336 2039 ntBASIC7.83□□□□□ -1.16
RXRBP28702 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RXRBP28702 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.83□□□□□ -1.16
RXRBP28702 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 MFSD8-217ENST00000641178 4374 ntBASIC7.82□□□□□ -1.16
RXRBP28702 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 RNU6-1214P-201ENST00000363650 109 ntBASIC7.82□□□□□ -1.16
RXRBP28702 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 MIR199B-201ENST00000384849 110 ntBASIC7.82□□□□□ -1.16
RXRBP28702 AL355379.1-201ENST00000405542 640 ntBASIC7.82□□□□□ -1.16
RXRBP28702 AL356131.1-201ENST00000405826 414 ntBASIC7.82□□□□□ -1.16
RXRBP28702 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 AL445928.1-201ENST00000435545 222 ntBASIC7.82□□□□□ -1.16
RXRBP28702 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 AL445567.1-201ENST00000439121 144 ntBASIC7.82□□□□□ -1.16
RXRBP28702 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 TPT1P1-201ENST00000458495 518 ntBASIC7.82□□□□□ -1.16
RXRBP28702 SNRPCP2-201ENST00000504370 475 ntBASIC7.82□□□□□ -1.16
RXRBP28702 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.82□□□□□ -1.16
RXRBP28702 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 AP003499.2-201ENST00000624100 483 ntBASIC7.82□□□□□ -1.16
RXRBP28702 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.82□□□□□ -1.16
RXRBP28702 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.82□□□□□ -1.16
RXRBP28702 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RXRBP28702 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 GUCY1B2-204ENST00000531898 1979 ntBASIC7.81□□□□□ -1.16
RXRBP28702 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.81□□□□□ -1.16
RXRBP28702 MTND5P29-201ENST00000458676 1807 ntBASIC7.81□□□□□ -1.16
RXRBP28702 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 HSPD1P16-201ENST00000402302 394 ntBASIC7.81□□□□□ -1.16
RXRBP28702 NUDT19P3-201ENST00000404698 555 ntBASIC7.81□□□□□ -1.16
RXRBP28702 RPS4XP9-201ENST00000405151 780 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AL355615.1-201ENST00000406187 641 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 MTCYBP5-201ENST00000423752 1135 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AC012519.1-201ENST00000424588 610 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 AC090018.1-201ENST00000434369 367 ntBASIC7.81□□□□□ -1.16
RXRBP28702 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 BX284632.1-201ENST00000478218 541 ntBASIC7.81□□□□□ -1.16
RXRBP28702 PDCL3P4-201ENST00000489621 720 ntBASIC7.81□□□□□ -1.16
RXRBP28702 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 OR7E128P-201ENST00000532736 1024 ntBASIC7.81□□□□□ -1.16
RXRBP28702 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 MIR4260-201ENST00000583107 67 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms