Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FGF7P6-202ENST00000451282 293 ntBASIC7.68□□□□□ -1.18
RFX1P22670 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.68□□□□□ -1.18
RFX1P22670 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.68□□□□□ -1.18
RFX1P22670 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RFX1P22670 AC015724.1-201ENST00000478577 156 ntBASIC7.68□□□□□ -1.18
RFX1P22670 RPS4XP15-201ENST00000489210 795 ntBASIC7.68□□□□□ -1.18
RFX1P22670 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.68□□□□□ -1.18
RFX1P22670 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.68□□□□□ -1.18
RFX1P22670 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.68□□□□□ -1.18
RFX1P22670 SCARNA18.2-201ENST00000516882 84 ntBASIC7.68□□□□□ -1.18
RFX1P22670 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.68□□□□□ -1.18
RFX1P22670 OR4A43P-201ENST00000532938 908 ntBASIC7.68□□□□□ -1.18
RFX1P22670 FXNP1-201ENST00000555153 337 ntBASIC7.68□□□□□ -1.18
RFX1P22670 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.68□□□□□ -1.18
RFX1P22670 AC022884.3-201ENST00000579571 248 ntBASIC7.68□□□□□ -1.18
RFX1P22670 OR4G1P-201ENST00000588632 938 ntBASIC7.68□□□□□ -1.18
RFX1P22670 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.68□□□□□ -1.18
RFX1P22670 AP000403.1-201ENST00000603349 851 ntBASIC7.68□□□□□ -1.18
RFX1P22670 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.68□□□□□ -1.18
RFX1P22670 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.68□□□□□ -1.18
RFX1P22670 AC018816.2-201ENST00000621460 353 ntBASIC7.68□□□□□ -1.18
RFX1P22670 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RFX1P22670 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RFX1P22670 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.68□□□□□ -1.18
RFX1P22670 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RFX1P22670 AC135352.1-201ENST00000506173 1418 ntBASIC7.68□□□□□ -1.18
RFX1P22670 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RFX1P22670 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RFX1P22670 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RFX1P22670 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 OR10J6P-201ENST00000289731 930 ntBASIC7.67□□□□□ -1.18
RFX1P22670 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RFX1P22670 RNU6-501P-201ENST00000364072 100 ntBASIC7.67□□□□□ -1.18
RFX1P22670 FAUP2-201ENST00000394301 401 ntBASIC7.67□□□□□ -1.18
RFX1P22670 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 RN7SKP254-201ENST00000410685 310 ntBASIC7.67□□□□□ -1.18
RFX1P22670 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 ATG4AP1-201ENST00000416893 538 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 RPL21P32-201ENST00000419877 477 ntBASIC7.67□□□□□ -1.18
RFX1P22670 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.67□□□□□ -1.18
RFX1P22670 FAM183DP-201ENST00000421987 399 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 TXNP5-201ENST00000441043 315 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC009237.4-201ENST00000441078 238 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 AC108463.1-201ENST00000450258 347 ntBASIC7.67□□□□□ -1.18
RFX1P22670 BX323845.2-201ENST00000458382 234 ntBASIC7.67□□□□□ -1.18
RFX1P22670 RN7SL168P-201ENST00000463821 279 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC096741.1-201ENST00000472250 846 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 SNX5P1-201ENST00000505757 1041 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC095057.1-201ENST00000507583 168 ntBASIC7.67□□□□□ -1.18
RFX1P22670 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 MTCO1P30-201ENST00000515244 580 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 RNU6-1261P-201ENST00000517194 104 ntBASIC7.67□□□□□ -1.18
RFX1P22670 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 OR11J2P-201ENST00000555298 907 ntBASIC7.67□□□□□ -1.18
RFX1P22670 ZNF519P2-201ENST00000557032 169 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 RN7SL32P-201ENST00000580514 281 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 ELOCP28-201ENST00000590044 317 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 AC012065.4-201ENST00000602445 679 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AL589743.7-201ENST00000612637 233 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC241377.1-201ENST00000619797 406 ntBASIC7.67□□□□□ -1.18
RFX1P22670 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.67□□□□□ -1.18
RFX1P22670 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 AC005609.4-201ENST00000625071 447 ntBASIC7.67□□□□□ -1.18
RFX1P22670 AC073869.7-201ENST00000640874 297 ntBASIC7.67□□□□□ -1.18
RFX1P22670 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.67□□□□□ -1.18
RFX1P22670 AC092821.2-201ENST00000545710 2042 ntBASIC7.67□□□□□ -1.18
RFX1P22670 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms