Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNA5SP91-201ENST00000390902 119 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AC233289.1-201ENST00000403700 508 ntBASIC5.43□□□□□ -1.54
CDH3P22223 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.43□□□□□ -1.54
CDH3P22223 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 AC006335.2-201ENST00000437993 330 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 AL591623.2-201ENST00000449978 222 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.43□□□□□ -1.54
CDH3P22223 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH3P22223 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH3P22223 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 RN7SKP34-201ENST00000516142 244 ntBASIC5.43□□□□□ -1.54
CDH3P22223 SCARNA21.2-201ENST00000516600 166 ntBASIC5.43□□□□□ -1.54
CDH3P22223 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH3P22223 OR8A2P-201ENST00000528631 952 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH3P22223 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH3P22223 HSPE1P2-201ENST00000554777 306 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AC007225.2-201ENST00000562529 256 ntBASIC5.43□□□□□ -1.54
CDH3P22223 MIR4675-201ENST00000577898 77 ntBASIC5.43□□□□□ -1.54
CDH3P22223 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH3P22223 PPATP2-201ENST00000605635 508 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AL121890.2-201ENST00000617644 465 ntBASIC5.43□□□□□ -1.54
CDH3P22223 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.43□□□□□ -1.54
CDH3P22223 AP001005.3-201ENST00000622049 129 ntBASIC5.43□□□□□ -1.54
CDH3P22223 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH3P22223 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH3P22223 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH3P22223 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH3P22223 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH3P22223 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 AC009962.1-201ENST00000567327 3813 ntBASIC5.43□□□□□ -1.54
CDH3P22223 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDH3P22223 PWAR1-201ENST00000624188 2414 ntBASIC5.43□□□□□ -1.54
CDH3P22223 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 AL589826.1-201ENST00000340697 249 ntBASIC5.42□□□□□ -1.54
CDH3P22223 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 RNA5SP132-201ENST00000364725 118 ntBASIC5.42□□□□□ -1.54
CDH3P22223 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 AL607077.1-201ENST00000401718 499 ntBASIC5.42□□□□□ -1.54
CDH3P22223 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH3P22223 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH3P22223 TRIM60P13-201ENST00000432350 1283 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH3P22223 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 AC093827.1-201ENST00000480094 861 ntBASIC5.42□□□□□ -1.54
CDH3P22223 RPS7P6-201ENST00000485777 579 ntBASIC5.42□□□□□ -1.54
CDH3P22223 DUTP7-201ENST00000507982 486 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH3P22223 ATP5LP3-201ENST00000514223 304 ntBASIC5.42□□□□□ -1.54
CDH3P22223 RN7SKP99-201ENST00000517028 307 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH3P22223 AC087272.1-201ENST00000523624 533 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AC084824.2-201ENST00000548906 345 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AL390334.1-201ENST00000556395 450 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 AC009268.1-201ENST00000561352 1203 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AC122134.1-201ENST00000565664 1104 ntBASIC5.42□□□□□ -1.54
CDH3P22223 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH3P22223 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 MIR4311-201ENST00000580794 100 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AP005262.1-201ENST00000582646 997 ntBASIC5.42□□□□□ -1.54
CDH3P22223 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH3P22223 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH3P22223 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH3P22223 HIRAP1-201ENST00000605318 787 ntBASIC5.42□□□□□ -1.54
CDH3P22223 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH3P22223 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 AC079395.2-201ENST00000610982 737 ntBASIC5.42□□□□□ -1.54
CDH3P22223 MIR6826-201ENST00000617808 98 ntBASIC5.42□□□□□ -1.54
CDH3P22223 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH3P22223 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 THAP12P5-201ENST00000405864 2275 ntBASIC5.42□□□□□ -1.54
CDH3P22223 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CDH3P22223 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CDH3P22223 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms