Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC004656.1-201ENST00000568479 4951 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.63□□□□□ -1.51
CAPN3P20807 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CAPN3P20807 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 AC090017.1-201ENST00000548612 1779 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 RNU6-650P-201ENST00000365658 111 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.63□□□□□ -1.51
CAPN3P20807 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.63□□□□□ -1.51
CAPN3P20807 AL158827.1-201ENST00000416300 391 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 RPL35AP31-201ENST00000418340 337 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AL390879.2-203ENST00000426943 1121 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 MTND6P12-201ENST00000428247 522 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 FO393419.3-201ENST00000428741 282 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.63□□□□□ -1.51
CAPN3P20807 AL161636.2-201ENST00000445179 927 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.63□□□□□ -1.51
CAPN3P20807 AL591623.2-201ENST00000449978 222 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.63□□□□□ -1.51
CAPN3P20807 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.63□□□□□ -1.51
CAPN3P20807 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 NPM1P29-201ENST00000483112 803 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.63□□□□□ -1.51
CAPN3P20807 SNORD46.2-201ENST00000516021 102 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.63□□□□□ -1.51
CAPN3P20807 AC013701.1-201ENST00000522657 465 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.63□□□□□ -1.51
CAPN3P20807 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.63□□□□□ -1.51
CAPN3P20807 AC036111.2-201ENST00000533247 901 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 AC079148.1-201ENST00000565944 819 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.63□□□□□ -1.51
CAPN3P20807 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.63□□□□□ -1.51
CAPN3P20807 AC092474.3-201ENST00000603022 568 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC123786.2-201ENST00000603459 275 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC079610.2-201ENST00000604818 690 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AL645933.2-201ENST00000606743 1207 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 AC139769.3-201ENST00000618383 175 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 MIR6730-201ENST00000622213 67 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CAPN3P20807 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 AC093311.1-201ENST00000506586 2021 ntBASIC5.63□□□□□ -1.51
CAPN3P20807 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.63□□□□□ -1.51
CAPN3P20807 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 AC239868.2-201ENST00000564237 4527 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CAPN3P20807 AC009962.1-201ENST00000567327 3813 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN3P20807 TMSB4XP4-201ENST00000323496 618 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 RNA5SP110-201ENST00000362638 115 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 SNORA62.2-201ENST00000364672 152 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CAPN3P20807 RNA5SP91-201ENST00000390902 119 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 AL132875.1-201ENST00000403623 949 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 AP000357.1-201ENST00000409926 1165 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 GTF3AP1-201ENST00000416942 1004 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN3P20807 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN3P20807 BX119904.1-201ENST00000432026 348 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 NPM1P18-201ENST00000434232 732 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 MTND2P40-201ENST00000436718 841 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN3P20807 RPS7P3-201ENST00000443360 580 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 MED28P3-201ENST00000444288 531 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN3P20807 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN3P20807 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CAPN3P20807 RNU6-1218P-201ENST00000458990 108 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 ACA64.1-201ENST00000459171 127 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 AC110749.1-201ENST00000462007 357 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN3P20807 RPL12P30-201ENST00000488389 499 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN3P20807 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 IGKV2D-10-201ENST00000520194 281 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 MTND2P7-201ENST00000521337 640 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 AP003396.4-201ENST00000527574 265 ntBASIC5.62□□□□□ -1.51
CAPN3P20807 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN3P20807 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN3P20807 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.62□□□□□ -1.51
CAPN3P20807 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms