Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC073310.1-201ENST00000423226 1033 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC113412.1-201ENST00000425840 504 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC011242.1-201ENST00000433596 1158 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC046176.1-201ENST00000435260 1170 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 RPS10P18-201ENST00000442662 495 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AL157884.3-201ENST00000448273 1184 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AZGP1P2-201ENST00000454506 345 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC007998.1-201ENST00000474156 672 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 RN7SL583P-201ENST00000475692 287 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 PPP1R11P1-201ENST00000486095 376 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 HAUS1P1-201ENST00000505275 832 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC034244.2-201ENST00000514668 858 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AP004609.2-201ENST00000532177 190 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC093014.1-201ENST00000548926 724 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 NOP56P3-201ENST00000549457 385 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC090888.3-201ENST00000558917 509 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC018754.1-201ENST00000607486 925 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AL133370.2-201ENST00000619934 439 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AP003476.1-201ENST00000623984 516 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC019080.5-201ENST00000624891 757 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 TMEM30CP-203ENST00000637814 1035 ntBASIC4.97□□□□□ -1.61
HLA-DOBP13765 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOBP13765 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOBP13765 OR13C1P-202ENST00000641378 2919 ntBASIC4.96□□□□□ -1.61
HLA-DOBP13765 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DOBP13765 LINC02019-201ENST00000608605 2060 ntBASIC4.96□□□□□ -1.61
HLA-DOBP13765 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DOBP13765 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DOBP13765 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DOBP13765 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.96□□□□□ -1.61
HLA-DOBP13765 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.96□□□□□ -1.61
HLA-DOBP13765 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
HLA-DOBP13765 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOBP13765 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOBP13765 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOBP13765 ICE2P1-201ENST00000512800 1849 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 RNA5SP284-201ENST00000384547 118 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 SNORD65-201ENST00000391079 73 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 U3.28-201ENST00000391249 210 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 MIR1282-201ENST00000408865 101 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 GLUD1P9-201ENST00000420997 1173 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 RPL7P56-201ENST00000429441 717 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 RPL36AP39-201ENST00000445859 318 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 VDAC2P4-201ENST00000452925 711 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 RN7SL205P-201ENST00000490174 284 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC138409.2-202ENST00000507274 458 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC109481.1-201ENST00000509173 282 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 MTCO3P27-201ENST00000514397 196 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DOBP13765 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOBP13765 IGBP1P1-201ENST00000554337 1009 ntBASIC4.96□□□□□ -1.62
HLA-DOBP13765 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms