Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.72□□□□□ -1.49
O00370 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
O00370 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
O00370 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 OR4K12P-201ENST00000406538 961 ntBASIC5.71□□□□□ -1.5
O00370 AL390774.1-201ENST00000411924 246 ntBASIC5.71□□□□□ -1.5
O00370 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.71□□□□□ -1.5
O00370 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 PTP4A1P1-201ENST00000420539 515 ntBASIC5.71□□□□□ -1.5
O00370 AC079355.1-201ENST00000421770 223 ntBASIC5.71□□□□□ -1.5
O00370 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.71□□□□□ -1.5
O00370 SPRYD7P1-201ENST00000443861 570 ntBASIC5.71□□□□□ -1.5
O00370 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.71□□□□□ -1.5
O00370 GAPDHP25-201ENST00000447061 1001 ntBASIC5.71□□□□□ -1.5
O00370 RPS26P41-201ENST00000450370 284 ntBASIC5.71□□□□□ -1.5
O00370 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.71□□□□□ -1.5
O00370 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.71□□□□□ -1.5
O00370 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.71□□□□□ -1.5
O00370 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.71□□□□□ -1.5
O00370 AC098976.1-201ENST00000513014 541 ntBASIC5.71□□□□□ -1.5
O00370 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.71□□□□□ -1.5
O00370 AC025423.2-201ENST00000537570 439 ntBASIC5.71□□□□□ -1.5
O00370 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.71□□□□□ -1.5
O00370 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.71□□□□□ -1.5
O00370 AC005341.1-201ENST00000571086 708 ntBASIC5.71□□□□□ -1.5
O00370 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.71□□□□□ -1.5
O00370 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.71□□□□□ -1.5
O00370 AC067838.1-201ENST00000606064 577 ntBASIC5.71□□□□□ -1.5
O00370 AL356608.1-201ENST00000610034 820 ntBASIC5.71□□□□□ -1.5
O00370 AC109583.2-201ENST00000617367 129 ntBASIC5.71□□□□□ -1.5
O00370 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.71□□□□□ -1.5
O00370 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 AC245100.2-201ENST00000454544 1679 ntBASIC5.71□□□□□ -1.5
O00370 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.71□□□□□ -1.5
O00370 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
O00370 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
O00370 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
O00370 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.71□□□□□ -1.5
O00370 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 AL078621.3-201ENST00000623707 2042 ntBASIC5.7□□□□□ -1.5
O00370 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.7□□□□□ -1.5
O00370 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 OR9K1P-201ENST00000326513 941 ntBASIC5.7□□□□□ -1.5
O00370 RNA5SP183-201ENST00000362452 119 ntBASIC5.7□□□□□ -1.5
O00370 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
O00370 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.7□□□□□ -1.5
O00370 AC098592.2-201ENST00000413158 265 ntBASIC5.7□□□□□ -1.5
O00370 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.7□□□□□ -1.5
O00370 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.7□□□□□ -1.5
O00370 HMGB1P32-201ENST00000425971 565 ntBASIC5.7□□□□□ -1.5
O00370 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.7□□□□□ -1.5
O00370 CYCSP6-201ENST00000434498 302 ntBASIC5.7□□□□□ -1.5
O00370 AC097523.2-201ENST00000435551 652 ntBASIC5.7□□□□□ -1.5
O00370 AC011225.1-201ENST00000457751 369 ntBASIC5.7□□□□□ -1.5
O00370 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.7□□□□□ -1.5
O00370 AC058823.1-201ENST00000485315 474 ntBASIC5.7□□□□□ -1.5
O00370 AL049874.2-201ENST00000492636 288 ntBASIC5.7□□□□□ -1.5
O00370 RN7SL447P-201ENST00000494711 245 ntBASIC5.7□□□□□ -1.5
O00370 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.7□□□□□ -1.5
O00370 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.7□□□□□ -1.5
O00370 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.7□□□□□ -1.5
O00370 ATP5LP3-201ENST00000514223 304 ntBASIC5.7□□□□□ -1.5
O00370 IGKV2-18-201ENST00000522607 343 ntBASIC5.7□□□□□ -1.5
O00370 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.7□□□□□ -1.5
O00370 HMGB1P40-201ENST00000525121 540 ntBASIC5.7□□□□□ -1.5
O00370 OR8A2P-201ENST00000528631 952 ntBASIC5.7□□□□□ -1.5
O00370 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.7□□□□□ -1.5
O00370 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.7□□□□□ -1.5
O00370 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 GMCL1P2-201ENST00000605230 823 ntBASIC5.7□□□□□ -1.5
O00370 MIR6768-201ENST00000610734 72 ntBASIC5.7□□□□□ -1.5
O00370 AP003400.2-201ENST00000624036 666 ntBASIC5.7□□□□□ -1.5
O00370 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.7□□□□□ -1.5
O00370 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.7□□□□□ -1.5
O00370 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.7□□□□□ -1.5
O00370 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 AC073136.1-201ENST00000449426 2884 ntBASIC5.7□□□□□ -1.5
O00370 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.7□□□□□ -1.5
O00370 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.7□□□□□ -1.5
O00370 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.7□□□□□ -1.5
O00370 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.7□□□□□ -1.5
O00370 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
O00370 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms