Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 AL445670.1-201ENST00000618889 801 ntBASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 AC090617.9-201ENST00000623751 147 ntBASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 AC073488.3-201ENST00000631611 778 ntBASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 AC099654.15-201ENST00000639802 509 ntBASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 RBPJP7-201ENST00000442803 1447 ntBASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 RBPJP5-201ENST00000449433 1447 ntBASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3BP4Q9P0V3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RNA5SP279-201ENST00000365513 117 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 MIR137-201ENST00000385223 102 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RPL10P10-201ENST00000403509 664 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL158827.1-201ENST00000416300 391 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 KRR1P1-201ENST00000419430 803 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RPSAP65-201ENST00000429660 595 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC046176.1-201ENST00000435260 1170 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL445928.1-201ENST00000435545 222 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 GAPDHP59-201ENST00000435908 267 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 OR10R1P-201ENST00000441524 1141 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC245517.2-201ENST00000442890 346 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 MTCYBP21-201ENST00000443300 1113 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RPS7P3-201ENST00000443360 580 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 VN1R40P-201ENST00000455196 941 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 Z83838.1-202ENST00000456225 839 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC020779.1-201ENST00000478757 796 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RPL38P3-201ENST00000484463 213 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RN7SL284P-201ENST00000498823 275 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC106822.1-201ENST00000502647 526 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 MTND4P8-201ENST00000514997 1362 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RNU6-276P-201ENST00000516114 96 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AP001284.1-201ENST00000528393 2118 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC004923.2-201ENST00000529649 369 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC121758.1-202ENST00000556917 658 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AP000919.1-202ENST00000581139 1264 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 MIR4701-201ENST00000583094 63 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC006115.2-201ENST00000596823 202 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC084373.1-201ENST00000603311 235 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AL133481.2-203ENST00000607558 139 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 uc_338.31-201ENST00000615595 186 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 HTR1DP1-201ENST00000616500 888 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 RNA5SP439-201ENST00000617595 124 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 AC068620.4-201ENST00000636730 1182 ntBASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3BP4Q9P0V3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SH3BP4Q9P0V3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms