Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FO681491.1-202ENST00000623392 737 ntBASIC6.34□□□□□ -1.39
UPF2Q9HAU5 AC007683.2-201ENST00000624681 714 ntBASIC6.34□□□□□ -1.39
UPF2Q9HAU5 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.34□□□□□ -1.39
UPF2Q9HAU5 MIR193BHG-214ENST00000641765 509 ntBASIC6.34□□□□□ -1.39
UPF2Q9HAU5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UPF2Q9HAU5 TET1P1-201ENST00000426627 2301 ntBASIC6.34□□□□□ -1.39
UPF2Q9HAU5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
UPF2Q9HAU5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UPF2Q9HAU5 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UPF2Q9HAU5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC6.34□□□□□ -1.39
UPF2Q9HAU5 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
UPF2Q9HAU5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
UPF2Q9HAU5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
UPF2Q9HAU5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
UPF2Q9HAU5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 SCN1A-220ENST00000641603 12506 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC011447.7-201ENST00000624228 1590 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 RPL34P3-201ENST00000421454 338 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 PRUNEP1-201ENST00000425846 705 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 GAPDHP34-201ENST00000432112 823 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 BTF3P6-201ENST00000448054 499 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC073073.1-201ENST00000493920 463 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 RNA5SP303-201ENST00000516192 130 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 CYCSP22-201ENST00000517555 339 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC011853.1-201ENST00000518911 454 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 OOSP1P2-201ENST00000579644 351 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC090953.1-201ENST00000604305 1092 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 TAS2R6P-201ENST00000605022 826 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 BNIP3P41-202ENST00000616656 861 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AP001642.1-201ENST00000624727 2117 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AL596275.2-207ENST00000641188 675 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 AC139713.2-215ENST00000641428 5037 ntBASIC6.33□□□□□ -1.4
UPF2Q9HAU5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.33□□□□□ -1.4
UPF2Q9HAU5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 RN7SKP74-201ENST00000362849 309 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AL133388.1-201ENST00000404509 287 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC017078.1-201ENST00000416146 368 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 COX6CP13-201ENST00000428703 226 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 RPL34P6-201ENST00000432390 345 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 FMO7P-201ENST00000436045 768 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 EEF1B2P6-201ENST00000445713 673 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AL031584.1-201ENST00000447169 754 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC090638.1-201ENST00000498296 909 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AGGF1P9-201ENST00000561884 913 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC009779.8-202ENST00000607990 932 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC241377.1-201ENST00000619797 406 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AL353684.1-201ENST00000622677 1120 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC087821.1-201ENST00000623639 567 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 AC104260.2-201ENST00000623551 3497 ntBASIC6.32□□□□□ -1.4
UPF2Q9HAU5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF2Q9HAU5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 MTCO1P46-201ENST00000451639 1491 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 OR52B3P-201ENST00000314715 928 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 U3.32-201ENST00000408116 212 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 HMGN1P20-201ENST00000411849 300 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms