Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL121578.2-201ENST00000448797 447 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 CCNJP1-201ENST00000450600 1149 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 RPS7P7-201ENST00000463499 571 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC021146.7-201ENST00000509604 775 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL390198.2-201ENST00000510553 222 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC092851.1-201ENST00000535964 478 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 DUXAP1-201ENST00000556632 463 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ANP32BP1-202ENST00000568553 737 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL031281.1-201ENST00000604049 488 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 SUMO2P14-201ENST00000604488 293 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 NDUFB9P1-201ENST00000604683 510 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL592494.3-201ENST00000609485 464 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC109347.2-201ENST00000610220 349 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 VN1R7P-201ENST00000619242 903 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC005261.2-201ENST00000593427 4258 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 Y_RNA.3-201ENST00000362331 103 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RN7SKP250-201ENST00000363924 321 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RN7SKP187-201ENST00000365536 330 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC098592.1-201ENST00000419352 333 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC007327.1-201ENST00000447461 264 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL109741.2-201ENST00000455561 343 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC084754.1-201ENST00000463466 464 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RPS7P10-201ENST00000464254 603 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RNA5SP473-201ENST00000516402 125 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RNU6-1178P-201ENST00000516674 107 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL121766.1-201ENST00000547436 487 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC006362.1-201ENST00000567392 174 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 EIF1P4-201ENST00000572664 335 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL136363.2-201ENST00000604173 851 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL158062.1-201ENST00000619632 745 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC005514.1-201ENST00000623521 208 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AC005609.4-201ENST00000625071 447 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms