Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 RN7SKP145-201ENST00000363291 303 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 SNORA2.3-201ENST00000383920 135 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 AL049697.2-201ENST00000403708 294 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 AL158073.1-201ENST00000426848 1104 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 snoU13.1-201ENST00000459157 104 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 AC006967.1-201ENST00000467608 589 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 AC020779.1-201ENST00000478757 796 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 AL139124.1-201ENST00000609123 421 ntBASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
SHANK3Q9BYB0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 OR51B3P-201ENST00000412287 913 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 MRPS21P2-201ENST00000424704 264 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 OR52A4P-201ENST00000472867 958 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 AC020593.1-201ENST00000507399 299 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 SCARNA13-201ENST00000516672 275 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 AL355488.2-201ENST00000609909 2850 ntBASIC6.6□□□□□ -1.35
SHANK3Q9BYB0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 RNU6-761P-201ENST00000384148 107 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 GPS2P1-201ENST00000411761 986 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 RPL23AP56-201ENST00000460778 453 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 RPS24P16-201ENST00000497294 392 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 AC098976.1-201ENST00000513014 541 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 OR8G5-201ENST00000524943 1041 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 MAPK10-270ENST00000641102 3538 ntBASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.59□□□□□ -1.35
SHANK3Q9BYB0 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 SNORA70.9-201ENST00000384370 135 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 FABP7P1-201ENST00000424004 391 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 FTH1P25-201ENST00000447665 469 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC111000.3-201ENST00000508057 576 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC010632.3-201ENST00000611377 369 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 AC005962.2-201ENST00000611427 652 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 MIR6839-201ENST00000620425 113 ntBASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.59□□□□□ -1.36
SHANK3Q9BYB0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 AC079298.1-201ENST00000625026 1619 ntBASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 AL592148.3-201ENST00000608771 2646 ntBASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 RPS3AP23-201ENST00000401762 784 ntBASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 AC013356.1-201ENST00000489027 564 ntBASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 AC011005.3-201ENST00000491624 395 ntBASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 IGBP1P4-201ENST00000503202 879 ntBASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.58□□□□□ -1.36
SHANK3Q9BYB0 AC245389.1-201ENST00000605141 529 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms