Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL450326.2-201ENST00000421913 1962 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSX3Q99909 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 AC117409.1-201ENST00000470499 1310 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 TMSB4XP2-201ENST00000335179 210 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 LYPLA1P3-201ENST00000402650 695 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 RN7SKP222-201ENST00000410651 315 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 METTL15P3-201ENST00000415522 1221 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX3Q99909 AC006455.6-201ENST00000426192 893 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 RPS29P14-201ENST00000431518 171 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 AC099670.2-201ENST00000435130 321 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX3Q99909 CLIC4P1-201ENST00000453177 535 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 RPL7AP52-201ENST00000458096 790 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 ACTR6P1-201ENST00000514311 1104 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AC111000.6-201ENST00000514471 709 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 TPM3P3-201ENST00000521343 354 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX3Q99909 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX3Q99909 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX3Q99909 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX3Q99909 AC008521.2-201ENST00000591021 259 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AL021368.1-201ENST00000607490 540 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 AL354696.1-201ENST00000614652 497 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX3Q99909 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSX3Q99909 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 AC000123.3-201ENST00000624029 4975 ntBASIC4.84□□□□□ -1.63
SSX3Q99909 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSX3Q99909 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
SSX3Q99909 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
SSX3Q99909 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SSX3Q99909 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SSX3Q99909 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SSX3Q99909 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSX3Q99909 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.64
SSX3Q99909 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSX3Q99909 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSX3Q99909 AC009313.2-201ENST00000417893 1941 ntBASIC4.84□□□□□ -1.64
SSX3Q99909 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.83□□□□□ -1.64
SSX3Q99909 AC091305.2-201ENST00000624049 1576 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 AC083843.3-201ENST00000623679 2186 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSX3Q99909 RNA5SP435-201ENST00000364044 108 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 GSTA12P-201ENST00000402398 508 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 BX284632.2-201ENST00000421091 399 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 NMD3P2-201ENST00000421815 761 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 MTND6P12-201ENST00000428247 522 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 NDUFS5P5-201ENST00000437256 321 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 VN1R110P-201ENST00000438988 971 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL512605.1-202ENST00000441919 381 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 BTBD7P2-201ENST00000441962 620 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 AL359955.2-201ENST00000445380 353 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 AP002345.1-201ENST00000456493 928 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC023245.1-201ENST00000468501 517 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL122020.1-201ENST00000472287 459 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms