Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC099340.1-201ENST00000475247 599 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 RN7SL612P-201ENST00000497704 295 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 CCDC11P1-201ENST00000503137 1162 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC147055.4-201ENST00000504399 745 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 HSPE1P23-201ENST00000509838 286 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC008549.1-201ENST00000512900 643 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AL139174.1-201ENST00000531489 886 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC092747.2-201ENST00000545069 983 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 CCNG2P1-201ENST00000549521 1000 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC245505.1-201ENST00000556398 224 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC018714.1-201ENST00000605028 208 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AL592221.1-201ENST00000605266 382 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AL031775.1-201ENST00000607014 887 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AL391497.1-201ENST00000608671 547 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC138749.5-201ENST00000611461 208 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 MIR6885-201ENST00000612241 66 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC010678.1-201ENST00000614118 713 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC012676.3-201ENST00000614983 479 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 MIR6503-201ENST00000622884 86 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AP000577.1-201ENST00000624366 878 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AC127502.3-201ENST00000636170 1206 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 AL354702.2-202ENST00000641481 890 ntBASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCHD1Q96NR3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.27□□□□□ -1.4
PTCHD1Q96NR3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 METTL21EP-201ENST00000298105 713 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC010894.1-201ENST00000313760 361 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 RPL24P4-201ENST00000326586 421 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 RNA5SP105-201ENST00000391123 113 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AL034417.1-201ENST00000399343 800 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AL133264.1-201ENST00000407157 562 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 RPL7P8-201ENST00000411964 730 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC007435.1-201ENST00000421086 415 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 MED14P1-201ENST00000430517 648 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 MTCO1P52-201ENST00000433928 531 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC093716.1-201ENST00000435923 377 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 NDUFS5P5-201ENST00000437256 321 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 IGBP1P3-201ENST00000447449 1000 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 MTND6P5-201ENST00000448266 512 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC115223.1-201ENST00000466377 870 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC021006.1-201ENST00000489849 553 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 HMGB3P13-201ENST00000511263 607 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 RFPL4AP3-201ENST00000515267 345 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC068135.2-201ENST00000569293 1028 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms