Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 NXF4-202ENST00000416098 1465 ntBASIC5.56□□□□□ -1.52
CPEB3Q8NE35 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 AC116158.1-201ENST00000560231 2129 ntBASIC5.56□□□□□ -1.52
CPEB3Q8NE35 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.56□□□□□ -1.52
CPEB3Q8NE35 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 Y_RNA.77-201ENST00000362962 107 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 SNORD116.1-201ENST00000365628 92 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 U3.23-201ENST00000391132 200 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC233289.1-201ENST00000403700 508 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AL021407.1-201ENST00000404531 386 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 BTF3P8-201ENST00000414577 526 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 GTF2IP2-201ENST00000424290 697 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 MGAT2P2-201ENST00000427194 797 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 RPS4XP16-201ENST00000427198 791 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 MTCO2P16-201ENST00000436962 677 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 NPM1P33-201ENST00000438918 872 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AL353898.1-201ENST00000444055 238 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 CASP3P1-201ENST00000446037 609 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 OR51B8P-201ENST00000449892 769 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 NECAP1P2-201ENST00000455668 727 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 SNX18P26-201ENST00000458433 740 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 GM2AP2-201ENST00000491764 562 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC093816.1-201ENST00000515076 913 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 TMEM97P2-201ENST00000517841 403 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 COX6B1P4-201ENST00000519826 484 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 IGHV1-14-201ENST00000523391 241 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 CYCSP25-201ENST00000525280 316 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 DEFB130C-202ENST00000530001 230 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC233702.7-202ENST00000582941 211 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC026898.1-201ENST00000586404 571 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC011497.2-201ENST00000600255 639 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 NDUFB9P1-201ENST00000604683 510 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC104073.3-201ENST00000610942 955 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC015819.1-201ENST00000613588 663 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AL133243.1-201ENST00000614487 366 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC006338.2-201ENST00000616864 791 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 TCL6_3.1-201ENST00000619064 137 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 AC079248.2-201ENST00000623779 326 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 Z83820.1-201ENST00000456978 1499 ntBASIC5.55□□□□□ -1.52
CPEB3Q8NE35 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.55□□□□□ -1.52
CPEB3Q8NE35 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 AC110373.1-201ENST00000505994 3505 ntBASIC5.54□□□□□ -1.52
CPEB3Q8NE35 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CPEB3Q8NE35 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms