Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MTND1P24-201ENST00000552175 861 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AGGF1P7-201ENST00000562369 913 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AP001496.3-201ENST00000580230 913 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 FAM27E4-201ENST00000605259 342 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC013244.3-201ENST00000605614 388 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MIR6780B-201ENST00000610307 79 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MIR6133-201ENST00000617057 108 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC099654.9-201ENST00000637055 678 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC005261.2-201ENST00000593427 4258 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC087565.3-202ENST00000642085 1603 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 MTCO1P4-201ENST00000520516 1409 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 SNORD115-48-201ENST00000364764 76 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 MIR421-201ENST00000365696 85 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC005042.1-201ENST00000393397 800 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 GPS2P1-201ENST00000411761 986 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 VN1R31P-201ENST00000417498 730 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 OR10T1P-201ENST00000424327 947 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 PCBP2P1-201ENST00000437262 977 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 RN7SL570P-201ENST00000484405 292 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC090543.1-201ENST00000492168 485 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 RPL23AP73-201ENST00000492507 471 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC009120.1-201ENST00000493458 473 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC025458.1-201ENST00000506046 166 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC074255.1-201ENST00000511259 501 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 SCARNA6.1-201ENST00000516989 238 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 HMGN2P36-201ENST00000529541 409 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC009962.1-201ENST00000567327 3813 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 MIR4260-201ENST00000583107 67 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL133247.2-201ENST00000603236 482 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC244100.4-201ENST00000617747 388 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC024884.1-201ENST00000620583 399 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC073592.6-201ENST00000624271 415 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC004808.1-201ENST00000627671 721 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC099654.8-201ENST00000637757 681 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AL596275.2-207ENST00000641188 675 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AC009501.3-201ENST00000605001 1352 ntBASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms