Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AP000843.1-201ENST00000624880 701 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 CASC15-203ENST00000605917 4461 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ECM1P2-201ENST00000503354 1577 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 SNORA48.4-201ENST00000391089 134 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 RPL11P3-201ENST00000395256 523 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 FABP5P2-201ENST00000439042 408 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 RPL7L1P8-201ENST00000469911 741 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC090948.2-201ENST00000607363 564 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 MFSD8-220ENST00000641243 1422 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 SNORA66-201ENST00000384792 133 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 GLUD1P9-201ENST00000420997 1173 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AP001324.1-201ENST00000428553 399 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 TXNP2-201ENST00000443918 295 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 CYCSP34-201ENST00000458172 304 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 KPNA2P3-201ENST00000584190 848 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC008782.1-201ENST00000603386 430 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC024220.1-201ENST00000603675 484 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC069200.1-201ENST00000609511 323 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AL049536.1-201ENST00000625043 744 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 CASC19-255ENST00000641733 1385 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 ATP5F1P2-201ENST00000398143 760 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 RPS3AP25-201ENST00000411660 793 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC114755.2-201ENST00000413520 361 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 CEACAMP8-201ENST00000413902 580 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 NDUFB4P8-201ENST00000435351 367 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 RPSAP51-201ENST00000497462 645 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC098976.1-201ENST00000513014 541 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC105342.1-201ENST00000378334 6848 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC079097.1-201ENST00000512187 1399 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC106806.2-201ENST00000509365 500 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 MIR3124-201ENST00000582636 67 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 UGT2B26P-201ENST00000508672 1613 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 ERG-204ENST00000398907 4809 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms