Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CLUHP1-201ENST00000435012 1190 ntBASIC4.5□□□□□ -1.69
LMO4P61968 GAPDHP25-201ENST00000447061 1001 ntBASIC4.5□□□□□ -1.69
LMO4P61968 TVP23BP2-201ENST00000455082 615 ntBASIC4.5□□□□□ -1.69
LMO4P61968 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 RPL7P6-201ENST00000480903 738 ntBASIC4.5□□□□□ -1.69
LMO4P61968 RPSAP50-201ENST00000481955 852 ntBASIC4.5□□□□□ -1.69
LMO4P61968 SNRPCP2-201ENST00000504370 475 ntBASIC4.5□□□□□ -1.69
LMO4P61968 MTATP6P9-201ENST00000515039 680 ntBASIC4.5□□□□□ -1.69
LMO4P61968 GAPDHP62-201ENST00000515313 990 ntBASIC4.5□□□□□ -1.69
LMO4P61968 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 MTND5P21-201ENST00000531961 522 ntBASIC4.5□□□□□ -1.69
LMO4P61968 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.5□□□□□ -1.69
LMO4P61968 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.5□□□□□ -1.69
LMO4P61968 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.5□□□□□ -1.69
LMO4P61968 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AC069307.1-201ENST00000602820 447 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL583832.1-201ENST00000603227 784 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL357094.1-201ENST00000603845 844 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL445222.1-201ENST00000607259 628 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.5□□□□□ -1.69
LMO4P61968 AL590410.1-201ENST00000617925 333 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AC022960.3-201ENST00000619794 441 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AC009120.7-201ENST00000623452 780 ntBASIC4.5□□□□□ -1.69
LMO4P61968 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 MTND4P21-201ENST00000453886 1357 ntBASIC4.5□□□□□ -1.69
LMO4P61968 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.5□□□□□ -1.69
LMO4P61968 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LMO4P61968 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMO4P61968 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 AC245100.2-201ENST00000454544 1679 ntBASIC4.49□□□□□ -1.69
LMO4P61968 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMO4P61968 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMO4P61968 RNU1-149P-201ENST00000390870 161 ntBASIC4.49□□□□□ -1.69
LMO4P61968 OR4K12P-201ENST00000406538 961 ntBASIC4.49□□□□□ -1.69
LMO4P61968 DUTP5-201ENST00000406790 469 ntBASIC4.49□□□□□ -1.69
LMO4P61968 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.49□□□□□ -1.69
LMO4P61968 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 AL645638.1-201ENST00000440519 361 ntBASIC4.49□□□□□ -1.69
LMO4P61968 RPS11P7-201ENST00000442125 465 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 AL451063.1-201ENST00000450164 1133 ntBASIC4.49□□□□□ -1.69
LMO4P61968 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.49□□□□□ -1.69
LMO4P61968 AL389915.2-201ENST00000454576 441 ntBASIC4.49□□□□□ -1.69
LMO4P61968 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMO4P61968 RPS18P6-201ENST00000476880 458 ntBASIC4.49□□□□□ -1.69
LMO4P61968 RN7SL808P-201ENST00000496066 299 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC015864.1-201ENST00000496512 544 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC231760.1-201ENST00000498002 260 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.49□□□□□ -1.69
LMO4P61968 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 AC147055.3-201ENST00000510547 851 ntBASIC4.49□□□□□ -1.69
LMO4P61968 RNA5SP116-201ENST00000516132 98 ntBASIC4.49□□□□□ -1.69
LMO4P61968 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AP001804.2-201ENST00000533932 910 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AP004607.2-201ENST00000533949 322 ntBASIC4.49□□□□□ -1.69
LMO4P61968 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 AC005000.1-201ENST00000536192 288 ntBASIC4.49□□□□□ -1.69
LMO4P61968 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.49□□□□□ -1.69
LMO4P61968 OR11J2P-201ENST00000555298 907 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.49□□□□□ -1.69
LMO4P61968 AL132657.2-201ENST00000564417 358 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms