Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PDX1P52945 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.33□□□□□ -1.56
PDX1P52945 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AC103591.2-201ENST00000265259 766 ntBASIC5.33□□□□□ -1.56
PDX1P52945 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PDX1P52945 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.33□□□□□ -1.56
PDX1P52945 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.33□□□□□ -1.56
PDX1P52945 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 PRUNEP1-201ENST00000425846 705 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AL590762.4-201ENST00000425885 253 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.33□□□□□ -1.56
PDX1P52945 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.33□□□□□ -1.56
PDX1P52945 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.33□□□□□ -1.56
PDX1P52945 SNRPCP3-201ENST00000474888 476 ntBASIC5.33□□□□□ -1.56
PDX1P52945 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AC025181.1-201ENST00000477507 416 ntBASIC5.33□□□□□ -1.56
PDX1P52945 OR9N1P-201ENST00000491296 333 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AC136777.2-201ENST00000522979 358 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.33□□□□□ -1.56
PDX1P52945 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.33□□□□□ -1.56
PDX1P52945 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.33□□□□□ -1.56
PDX1P52945 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.33□□□□□ -1.56
PDX1P52945 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.33□□□□□ -1.56
PDX1P52945 AP002884.5-201ENST00000595053 1132 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AC025857.2-201ENST00000602711 238 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AP002505.2-201ENST00000623585 696 ntBASIC5.33□□□□□ -1.56
PDX1P52945 AC140479.2-201ENST00000421567 3130 ntBASIC5.33□□□□□ -1.56
PDX1P52945 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.33□□□□□ -1.56
PDX1P52945 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PDX1P52945 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 AC090220.1-201ENST00000593078 1699 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 RNA5SP443-201ENST00000363083 132 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RNU6-697P-201ENST00000363348 107 ntBASIC5.32□□□□□ -1.56
PDX1P52945 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 RNU11-201ENST00000387069 134 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AL133270.1-201ENST00000402635 279 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AL358178.1-201ENST00000407698 397 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RN7SKP216-201ENST00000411050 312 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AL512504.1-201ENST00000415494 778 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RNGTTP1-201ENST00000420965 728 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.32□□□□□ -1.56
PDX1P52945 AC092106.1-201ENST00000444291 373 ntBASIC5.32□□□□□ -1.56
PDX1P52945 MEMO1P4-201ENST00000453590 386 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC091685.2-201ENST00000454924 864 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AL049829.1-201ENST00000465411 156 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RPS7P6-201ENST00000485777 579 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RN7SL447P-201ENST00000494711 245 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC147055.3-201ENST00000510547 851 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.32□□□□□ -1.56
PDX1P52945 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.32□□□□□ -1.56
PDX1P52945 OR10D4P-201ENST00000525892 951 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.32□□□□□ -1.56
PDX1P52945 AC022832.1-201ENST00000530718 645 ntBASIC5.32□□□□□ -1.56
PDX1P52945 OR8G3P-201ENST00000533406 921 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.32□□□□□ -1.56
PDX1P52945 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.32□□□□□ -1.56
PDX1P52945 AC027281.1-201ENST00000574178 758 ntBASIC5.32□□□□□ -1.56
PDX1P52945 RBM22P1-201ENST00000578589 1214 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AL360012.1-201ENST00000602813 131 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC087763.1-201ENST00000603391 286 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AC073111.2-201ENST00000605657 1075 ntBASIC5.32□□□□□ -1.56
PDX1P52945 MIR6748-201ENST00000610433 71 ntBASIC5.32□□□□□ -1.56
PDX1P52945 AL356094.1-201ENST00000624663 1212 ntBASIC5.32□□□□□ -1.56
PDX1P52945 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.32□□□□□ -1.56
PDX1P52945 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PDX1P52945 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.32□□□□□ -1.56
PDX1P52945 AC023421.1-201ENST00000590535 1785 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms