Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 TVP23CP2-201ENST00000571473 623 ntBASIC7.29□□□□□ -1.24
MSH6P52701 MIR4675-201ENST00000577898 77 ntBASIC7.29□□□□□ -1.24
MSH6P52701 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.29□□□□□ -1.24
MSH6P52701 BNIP3P22-201ENST00000593399 556 ntBASIC7.29□□□□□ -1.24
MSH6P52701 AL512782.1-201ENST00000603093 364 ntBASIC7.29□□□□□ -1.24
MSH6P52701 AL139041.1-201ENST00000605480 610 ntBASIC7.29□□□□□ -1.24
MSH6P52701 AL133481.2-203ENST00000607558 139 ntBASIC7.29□□□□□ -1.24
MSH6P52701 AC068724.3-201ENST00000625906 87 ntBASIC7.29□□□□□ -1.24
MSH6P52701 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
MSH6P52701 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH6P52701 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MSH6P52701 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MSH6P52701 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH6P52701 AC011933.2-201ENST00000578539 2790 ntBASIC7.29□□□□□ -1.24
MSH6P52701 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.28□□□□□ -1.24
MSH6P52701 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
MSH6P52701 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.28□□□□□ -1.24
MSH6P52701 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 CASC19-260ENST00000641828 2001 ntBASIC7.28□□□□□ -1.24
MSH6P52701 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
MSH6P52701 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
MSH6P52701 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.28□□□□□ -1.24
MSH6P52701 RN7SKP100-201ENST00000411258 284 ntBASIC7.28□□□□□ -1.24
MSH6P52701 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.28□□□□□ -1.24
MSH6P52701 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 AC011005.3-201ENST00000491624 395 ntBASIC7.28□□□□□ -1.24
MSH6P52701 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.28□□□□□ -1.24
MSH6P52701 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.28□□□□□ -1.24
MSH6P52701 AL109618.2-201ENST00000605527 211 ntBASIC7.28□□□□□ -1.24
MSH6P52701 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.28□□□□□ -1.24
MSH6P52701 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.28□□□□□ -1.24
MSH6P52701 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.28□□□□□ -1.24
MSH6P52701 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH6P52701 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.28□□□□□ -1.24
MSH6P52701 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
MSH6P52701 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.27□□□□□ -1.25
MSH6P52701 AL132640.2-201ENST00000559968 1698 ntBASIC7.27□□□□□ -1.25
MSH6P52701 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 RNU1-136P-201ENST00000384181 164 ntBASIC7.27□□□□□ -1.25
MSH6P52701 RPS27AP7-201ENST00000422792 455 ntBASIC7.27□□□□□ -1.25
MSH6P52701 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.27□□□□□ -1.25
MSH6P52701 RIMKLBP2-201ENST00000424737 654 ntBASIC7.27□□□□□ -1.25
MSH6P52701 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.27□□□□□ -1.25
MSH6P52701 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.27□□□□□ -1.25
MSH6P52701 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.27□□□□□ -1.25
MSH6P52701 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
MSH6P52701 GAPDHP56-201ENST00000506031 988 ntBASIC7.27□□□□□ -1.25
MSH6P52701 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.27□□□□□ -1.25
MSH6P52701 OR4A6P-201ENST00000534364 970 ntBASIC7.27□□□□□ -1.25
MSH6P52701 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
MSH6P52701 AC092653.1-201ENST00000608509 531 ntBASIC7.27□□□□□ -1.25
MSH6P52701 AC099654.6-201ENST00000636487 512 ntBASIC7.27□□□□□ -1.25
MSH6P52701 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.27□□□□□ -1.25
MSH6P52701 AL031123.3-201ENST00000623345 1837 ntBASIC7.27□□□□□ -1.25
MSH6P52701 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.27□□□□□ -1.25
MSH6P52701 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
MSH6P52701 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.27□□□□□ -1.25
MSH6P52701 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MSH6P52701 AL359955.1-201ENST00000455242 3275 ntBASIC7.26□□□□□ -1.25
MSH6P52701 HSPD1P7-201ENST00000447985 1686 ntBASIC7.26□□□□□ -1.25
MSH6P52701 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.26□□□□□ -1.25
MSH6P52701 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MSH6P52701 AC006206.1-201ENST00000544842 3387 ntBASIC7.26□□□□□ -1.25
MSH6P52701 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MSH6P52701 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
MSH6P52701 RN7SKP114-201ENST00000410327 279 ntBASIC7.26□□□□□ -1.25
MSH6P52701 CHIAP3-201ENST00000423668 1133 ntBASIC7.26□□□□□ -1.25
MSH6P52701 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.26□□□□□ -1.25
MSH6P52701 RPL7P11-201ENST00000437586 658 ntBASIC7.26□□□□□ -1.25
MSH6P52701 IGBP1P3-201ENST00000447449 1000 ntBASIC7.26□□□□□ -1.25
MSH6P52701 RPS17P5-201ENST00000498293 408 ntBASIC7.26□□□□□ -1.25
MSH6P52701 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.26□□□□□ -1.25
MSH6P52701 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.26□□□□□ -1.25
MSH6P52701 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.26□□□□□ -1.25
MSH6P52701 BNIP3P33-201ENST00000598912 569 ntBASIC7.26□□□□□ -1.25
MSH6P52701 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MSH6P52701 OR4F13P-202ENST00000560066 2054 ntBASIC7.26□□□□□ -1.25
MSH6P52701 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.26□□□□□ -1.25
MSH6P52701 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms