Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RPL35AP28-201ENST00000459730 331 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 AC093827.1-201ENST00000480094 861 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 NDUFB5P1-201ENST00000508134 564 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.61□□□□□ -1.51
BRCC3P46736 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.61□□□□□ -1.51
BRCC3P46736 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCC3P46736 AP002373.2-201ENST00000541631 1060 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
BRCC3P46736 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCC3P46736 AC009597.2-201ENST00000604659 592 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 Mico1.1-201ENST00000611698 204 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCC3P46736 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCC3P46736 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.61□□□□□ -1.51
BRCC3P46736 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCC3P46736 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCC3P46736 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCC3P46736 AC109446.4-201ENST00000623235 2755 ntBASIC5.61□□□□□ -1.51
BRCC3P46736 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
BRCC3P46736 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
BRCC3P46736 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCC3P46736 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCC3P46736 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
BRCC3P46736 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCC3P46736 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BRCC3P46736 RNA5SP90-201ENST00000364801 99 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 AL354868.1-201ENST00000417077 482 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.6□□□□□ -1.51
BRCC3P46736 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.6□□□□□ -1.51
BRCC3P46736 RANP7-201ENST00000418085 644 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 RPS26P13-201ENST00000419030 330 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.6□□□□□ -1.51
BRCC3P46736 AC009506.2-201ENST00000420635 840 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRCC3P46736 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.6□□□□□ -1.51
BRCC3P46736 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.6□□□□□ -1.51
BRCC3P46736 PA2G4P6-201ENST00000438325 1197 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 ABCC13-202ENST00000463099 3842 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 GLUD1P3-202ENST00000508551 200 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 AC111000.6-201ENST00000514471 709 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCC3P46736 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.6□□□□□ -1.51
BRCC3P46736 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 AC011447.4-201ENST00000587562 111 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 AP003072.5-201ENST00000623872 773 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.6□□□□□ -1.51
BRCC3P46736 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BRCC3P46736 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCC3P46736 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
BRCC3P46736 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
BRCC3P46736 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 AL138820.1-201ENST00000617901 5305 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 SNURFL-201ENST00000309296 343 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCC3P46736 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.59□□□□□ -1.51
BRCC3P46736 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
BRCC3P46736 NPM1P38-201ENST00000403835 865 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 SNORA81-201ENST00000408493 178 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
BRCC3P46736 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCC3P46736 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.59□□□□□ -1.51
BRCC3P46736 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCC3P46736 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.59□□□□□ -1.51
BRCC3P46736 AL359265.1-201ENST00000440296 795 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.59□□□□□ -1.51
BRCC3P46736 AL645937.3-201ENST00000453647 936 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.59□□□□□ -1.51
BRCC3P46736 AC079168.1-201ENST00000458741 345 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 snoU13.20-201ENST00000459180 104 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 AC108161.1-201ENST00000461060 402 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 AC026782.2-201ENST00000510845 636 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 AC097486.1-201ENST00000515331 210 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCC3P46736 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.59□□□□□ -1.51
BRCC3P46736 AL162431.4-201ENST00000604674 411 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 RNA5SP439-201ENST00000617595 124 ntBASIC5.59□□□□□ -1.51
BRCC3P46736 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCC3P46736 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCC3P46736 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
BRCC3P46736 AP005435.3-201ENST00000531260 3198 ntBASIC5.59□□□□□ -1.52
BRCC3P46736 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
BRCC3P46736 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
BRCC3P46736 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCC3P46736 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCC3P46736 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms