Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 SDAD1P1-202ENST00000524156 2051 ntBASIC6.61□□□□□ -1.35
RFC4P35249 NR1H5P-201ENST00000452683 1377 ntBASIC6.61□□□□□ -1.35
RFC4P35249 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.61□□□□□ -1.35
RFC4P35249 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 AC079741.1-201ENST00000321498 212 ntBASIC6.61□□□□□ -1.35
RFC4P35249 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RFC4P35249 RNA5SP90-201ENST00000364801 99 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AP002530.1-201ENST00000405705 684 ntBASIC6.61□□□□□ -1.35
RFC4P35249 RN7SKP114-201ENST00000410327 279 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.61□□□□□ -1.35
RFC4P35249 AL513533.1-201ENST00000453728 415 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AC079168.1-201ENST00000458741 345 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.61□□□□□ -1.35
RFC4P35249 RPL23AP72-201ENST00000492447 435 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 COX6B1P5-201ENST00000509843 249 ntBASIC6.61□□□□□ -1.35
RFC4P35249 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 GAPDHP62-201ENST00000515313 990 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.61□□□□□ -1.35
RFC4P35249 OR7E128P-201ENST00000532736 1024 ntBASIC6.61□□□□□ -1.35
RFC4P35249 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 MEMO1P5-201ENST00000604810 406 ntBASIC6.61□□□□□ -1.35
RFC4P35249 MIR6780A-201ENST00000615089 68 ntBASIC6.61□□□□□ -1.35
RFC4P35249 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.61□□□□□ -1.35
RFC4P35249 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.61□□□□□ -1.35
RFC4P35249 AP000547.3-204ENST00000588548 2523 ntBASIC6.61□□□□□ -1.35
RFC4P35249 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
RFC4P35249 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.61□□□□□ -1.35
RFC4P35249 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
RFC4P35249 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 CDY3P-201ENST00000454543 1618 ntBASIC6.61□□□□□ -1.35
RFC4P35249 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 AL158152.1-201ENST00000602652 1435 ntBASIC6.6□□□□□ -1.35
RFC4P35249 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.6□□□□□ -1.35
RFC4P35249 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.6□□□□□ -1.35
RFC4P35249 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.6□□□□□ -1.35
RFC4P35249 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 AC126755.2-208ENST00000327792 462 ntBASIC6.6□□□□□ -1.35
RFC4P35249 AC138969.1-213ENST00000331436 462 ntBASIC6.6□□□□□ -1.35
RFC4P35249 AL451142.1-201ENST00000375867 775 ntBASIC6.6□□□□□ -1.35
RFC4P35249 OR8V1P-201ENST00000395193 873 ntBASIC6.6□□□□□ -1.35
RFC4P35249 MRPS21P3-201ENST00000436696 262 ntBASIC6.6□□□□□ -1.35
RFC4P35249 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.6□□□□□ -1.35
RFC4P35249 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.6□□□□□ -1.35
RFC4P35249 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.6□□□□□ -1.35
RFC4P35249 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.6□□□□□ -1.35
RFC4P35249 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.6□□□□□ -1.35
RFC4P35249 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.6□□□□□ -1.35
RFC4P35249 AC104687.2-201ENST00000604442 342 ntBASIC6.6□□□□□ -1.35
RFC4P35249 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.6□□□□□ -1.35
RFC4P35249 AC009704.2-201ENST00000618739 483 ntBASIC6.6□□□□□ -1.35
RFC4P35249 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.6□□□□□ -1.35
RFC4P35249 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.6□□□□□ -1.35
RFC4P35249 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.6□□□□□ -1.35
RFC4P35249 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RFC4P35249 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFC4P35249 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.6□□□□□ -1.35
RFC4P35249 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFC4P35249 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFC4P35249 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFC4P35249 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFC4P35249 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RFC4P35249 AL121977.1-201ENST00000401636 979 ntBASIC6.59□□□□□ -1.35
RFC4P35249 AC017078.1-201ENST00000416146 368 ntBASIC6.59□□□□□ -1.35
RFC4P35249 AC068287.1-201ENST00000430283 295 ntBASIC6.59□□□□□ -1.35
RFC4P35249 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.59□□□□□ -1.35
RFC4P35249 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.59□□□□□ -1.35
RFC4P35249 AL606490.8-201ENST00000441624 319 ntBASIC6.59□□□□□ -1.35
RFC4P35249 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.59□□□□□ -1.35
RFC4P35249 AC009963.2-201ENST00000453431 138 ntBASIC6.59□□□□□ -1.35
RFC4P35249 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.59□□□□□ -1.35
RFC4P35249 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.59□□□□□ -1.35
RFC4P35249 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.59□□□□□ -1.35
RFC4P35249 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RFC4P35249 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.59□□□□□ -1.35
RFC4P35249 AC016542.2-201ENST00000624201 619 ntBASIC6.59□□□□□ -1.35
RFC4P35249 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFC4P35249 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.59□□□□□ -1.35
RFC4P35249 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFC4P35249 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RFC4P35249 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
RFC4P35249 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.58□□□□□ -1.36
RFC4P35249 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms