Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL356968.2-201ENST00000412769 1257 ntBASIC6.14□□□□□ -1.43
CIITAP33076 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 AC099670.2-201ENST00000435130 321 ntBASIC6.14□□□□□ -1.43
CIITAP33076 UBA52P7-201ENST00000486088 380 ntBASIC6.14□□□□□ -1.43
CIITAP33076 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.14□□□□□ -1.43
CIITAP33076 SNORA26.10-201ENST00000516427 141 ntBASIC6.14□□□□□ -1.43
CIITAP33076 SCARNA20.4-201ENST00000516969 131 ntBASIC6.14□□□□□ -1.43
CIITAP33076 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.14□□□□□ -1.43
CIITAP33076 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.14□□□□□ -1.43
CIITAP33076 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.14□□□□□ -1.43
CIITAP33076 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.14□□□□□ -1.43
CIITAP33076 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.14□□□□□ -1.43
CIITAP33076 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 AL360012.1-201ENST00000602813 131 ntBASIC6.14□□□□□ -1.43
CIITAP33076 AL512506.1-201ENST00000613918 449 ntBASIC6.14□□□□□ -1.43
CIITAP33076 AC021766.1-201ENST00000624404 741 ntBASIC6.14□□□□□ -1.43
CIITAP33076 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CIITAP33076 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.14□□□□□ -1.43
CIITAP33076 AC083837.1-201ENST00000565297 2994 ntBASIC6.14□□□□□ -1.43
CIITAP33076 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.14□□□□□ -1.43
CIITAP33076 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 AC092681.1-201ENST00000297369 291 ntBASIC6.13□□□□□ -1.43
CIITAP33076 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 U3.28-201ENST00000391249 210 ntBASIC6.13□□□□□ -1.43
CIITAP33076 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CIITAP33076 PPIAP9-201ENST00000403866 498 ntBASIC6.13□□□□□ -1.43
CIITAP33076 MIR1286-201ENST00000408112 78 ntBASIC6.13□□□□□ -1.43
CIITAP33076 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 VN1R31P-201ENST00000417498 730 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AL133325.1-201ENST00000421090 382 ntBASIC6.13□□□□□ -1.43
CIITAP33076 RPL7L1P9-201ENST00000431298 745 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 CYCSP6-201ENST00000434498 302 ntBASIC6.13□□□□□ -1.43
CIITAP33076 MAPRE1P3-201ENST00000435438 796 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.13□□□□□ -1.43
CIITAP33076 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.13□□□□□ -1.43
CIITAP33076 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.13□□□□□ -1.43
CIITAP33076 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.13□□□□□ -1.43
CIITAP33076 AC092905.1-201ENST00000467527 949 ntBASIC6.13□□□□□ -1.43
CIITAP33076 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CIITAP33076 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 RPL7P6-201ENST00000480903 738 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 SUMO2P4-201ENST00000504193 276 ntBASIC6.13□□□□□ -1.43
CIITAP33076 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 AC106806.2-201ENST00000509365 500 ntBASIC6.13□□□□□ -1.43
CIITAP33076 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 SEPT10P1-201ENST00000517342 1162 ntBASIC6.13□□□□□ -1.43
CIITAP33076 OR4R2P-201ENST00000530815 597 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AP004607.2-201ENST00000533949 322 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.13□□□□□ -1.43
CIITAP33076 RBM22P1-201ENST00000578589 1214 ntBASIC6.13□□□□□ -1.43
CIITAP33076 RN7SL356P-201ENST00000582228 248 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.13□□□□□ -1.43
CIITAP33076 AC020915.5-201ENST00000596836 964 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC011458.1-201ENST00000604034 617 ntBASIC6.13□□□□□ -1.43
CIITAP33076 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 uc_338.7-201ENST00000621834 124 ntBASIC6.13□□□□□ -1.43
CIITAP33076 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 AC007938.2-201ENST00000604666 2634 ntBASIC6.13□□□□□ -1.43
CIITAP33076 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 AL592429.1-201ENST00000403909 1473 ntBASIC6.13□□□□□ -1.43
CIITAP33076 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.13□□□□□ -1.43
CIITAP33076 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CIITAP33076 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CIITAP33076 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CIITAP33076 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 RNU6-819P-201ENST00000364116 107 ntBASIC6.12□□□□□ -1.43
CIITAP33076 SNORD56.6-201ENST00000384569 71 ntBASIC6.12□□□□□ -1.43
CIITAP33076 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CIITAP33076 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms