Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 ZNF849P-201ENST00000594711 1566 ntBASIC7.37□□□□□ -1.23
LIG1P18858 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.36□□□□□ -1.23
LIG1P18858 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
LIG1P18858 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 RNA5SP321-201ENST00000362722 111 ntBASIC7.36□□□□□ -1.23
LIG1P18858 RNA5SP140-201ENST00000364524 92 ntBASIC7.36□□□□□ -1.23
LIG1P18858 RNU6-867P-201ENST00000364956 107 ntBASIC7.36□□□□□ -1.23
LIG1P18858 MIR551B-201ENST00000384984 96 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AL360271.1-201ENST00000395679 510 ntBASIC7.36□□□□□ -1.23
LIG1P18858 HMGB1P10-201ENST00000395823 563 ntBASIC7.36□□□□□ -1.23
LIG1P18858 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 ERHP2-201ENST00000402323 299 ntBASIC7.36□□□□□ -1.23
LIG1P18858 RPS7P9-201ENST00000414704 586 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG1P18858 AC246680.2-201ENST00000422106 389 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AC244035.1-201ENST00000430042 390 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 MTND1P32-201ENST00000433043 938 ntBASIC7.36□□□□□ -1.23
LIG1P18858 RPS24P1-201ENST00000438550 371 ntBASIC7.36□□□□□ -1.23
LIG1P18858 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 AC092967.1-201ENST00000449016 481 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 TVP23CP1-201ENST00000450317 639 ntBASIC7.36□□□□□ -1.23
LIG1P18858 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 CEACAMP11-201ENST00000455211 583 ntBASIC7.36□□□□□ -1.23
LIG1P18858 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 RPL7P16-201ENST00000479738 738 ntBASIC7.36□□□□□ -1.23
LIG1P18858 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 SNRPCP11-201ENST00000492453 205 ntBASIC7.36□□□□□ -1.23
LIG1P18858 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG1P18858 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 IGHV1-14-201ENST00000523391 241 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 BTG1P1-201ENST00000540396 508 ntBASIC7.36□□□□□ -1.23
LIG1P18858 ELOCP32-201ENST00000548625 324 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.36□□□□□ -1.23
LIG1P18858 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG1P18858 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LIG1P18858 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG1P18858 RSL24D1P11-201ENST00000591045 491 ntBASIC7.36□□□□□ -1.23
LIG1P18858 VN1R90P-201ENST00000595717 726 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AP002906.1-201ENST00000603405 233 ntBASIC7.36□□□□□ -1.23
LIG1P18858 SNORD96A-201ENST00000606577 79 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AL158063.1-201ENST00000615349 536 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AL031658.2-201ENST00000616850 651 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AC244100.4-201ENST00000617747 388 ntBASIC7.36□□□□□ -1.23
LIG1P18858 AL158062.1-201ENST00000619632 745 ntBASIC7.36□□□□□ -1.23
LIG1P18858 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG1P18858 IMMTP1-201ENST00000435590 2219 ntBASIC7.36□□□□□ -1.23
LIG1P18858 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
LIG1P18858 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG1P18858 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 AC011455.2-201ENST00000599320 3336 ntBASIC7.35□□□□□ -1.23
LIG1P18858 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.35□□□□□ -1.23
LIG1P18858 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.35□□□□□ -1.23
LIG1P18858 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LIG1P18858 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LIG1P18858 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 RNU6-1215P-201ENST00000384441 102 ntBASIC7.35□□□□□ -1.23
LIG1P18858 SNORD94-201ENST00000386037 137 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC026310.1-201ENST00000396004 378 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 MTND1P23-201ENST00000416931 372 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AL359092.1-201ENST00000417156 265 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 CYP4F30P-202ENST00000420048 405 ntBASIC7.35□□□□□ -1.23
LIG1P18858 OR5W1P-201ENST00000423705 938 ntBASIC7.35□□□□□ -1.23
LIG1P18858 GTF2IP2-201ENST00000424290 697 ntBASIC7.35□□□□□ -1.23
LIG1P18858 GAPDHP33-201ENST00000443168 1013 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.35□□□□□ -1.23
LIG1P18858 REG1CP-206ENST00000447469 496 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms