Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 IGLVIV-64-201ENST00000518581 301 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC2P18074 AC026616.1-201ENST00000523157 525 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC2P18074 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC2P18074 OR4A43P-201ENST00000532938 908 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 AP004607.2-201ENST00000533949 322 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.58□□□□□ -1.52
ERCC2P18074 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC2P18074 MIR7853-201ENST00000584820 132 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 AC108738.1-201ENST00000603703 237 ntBASIC5.58□□□□□ -1.52
ERCC2P18074 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ERCC2P18074 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ERCC2P18074 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC2P18074 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ERCC2P18074 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ERCC2P18074 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 MIR133B-201ENST00000362210 119 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-1251P-201ENST00000364502 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-1320P-201ENST00000390838 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-1269P-201ENST00000391139 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 DBIP1-201ENST00000401435 260 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AL133388.1-201ENST00000404509 287 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AL512504.1-201ENST00000415494 778 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AL513325.1-201ENST00000417716 1034 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC114878.1-201ENST00000441166 358 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC2P18074 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-599P-201ENST00000459383 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-1193P-201ENST00000459461 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC2P18074 BLZF2P-201ENST00000553776 1130 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AC092868.3-201ENST00000560515 784 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC2P18074 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC2P18074 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.57□□□□□ -1.52
ERCC2P18074 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC2P18074 AC007620.3-201ENST00000608131 497 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 AC244107.2-201ENST00000611773 76 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-368P-201ENST00000620928 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 MIR8080-201ENST00000622224 89 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 RNU6-538P-201ENST00000622329 107 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
ERCC2P18074 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC2P18074 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 MTCO1P7-201ENST00000419523 1542 ntBASIC5.57□□□□□ -1.52
ERCC2P18074 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC2P18074 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
ERCC2P18074 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC2P18074 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC2P18074 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC2P18074 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC2P18074 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
ERCC2P18074 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC2P18074 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC2P18074 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC2P18074 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC2P18074 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC2P18074 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ERCC2P18074 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC2P18074 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC2P18074 SNORA11.3-201ENST00000408471 128 ntBASIC5.56□□□□□ -1.52
ERCC2P18074 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.56□□□□□ -1.52
ERCC2P18074 NAP1L4P2-201ENST00000425958 899 ntBASIC5.56□□□□□ -1.52
ERCC2P18074 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.56□□□□□ -1.52
ERCC2P18074 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.56□□□□□ -1.52
ERCC2P18074 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC2P18074 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC2P18074 AL157884.3-201ENST00000448273 1184 ntBASIC5.56□□□□□ -1.52
ERCC2P18074 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC2P18074 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC2P18074 RN7SL547P-201ENST00000490793 290 ntBASIC5.56□□□□□ -1.52
ERCC2P18074 IGBP1P4-201ENST00000503202 879 ntBASIC5.56□□□□□ -1.52
ERCC2P18074 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms