Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC005084.1-201ENST00000605160 304 ntBASIC5.89□□□□□ -1.47
RB1P06400 AC067838.1-201ENST00000606064 577 ntBASIC5.89□□□□□ -1.47
RB1P06400 AC104307.1-201ENST00000616142 196 ntBASIC5.89□□□□□ -1.47
RB1P06400 AC109583.2-201ENST00000617367 129 ntBASIC5.89□□□□□ -1.47
RB1P06400 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RB1P06400 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RB1P06400 AC119674.1-220ENST00000641502 1048 ntBASIC5.89□□□□□ -1.47
RB1P06400 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RB1P06400 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RB1P06400 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.89□□□□□ -1.47
RB1P06400 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RB1P06400 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RB1P06400 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RB1P06400 AC114947.2-201ENST00000565748 2125 ntBASIC5.89□□□□□ -1.47
RB1P06400 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RB1P06400 CASC19-281ENST00000642118 1554 ntBASIC5.89□□□□□ -1.47
RB1P06400 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.89□□□□□ -1.47
RB1P06400 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RB1P06400 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RB1P06400 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 SNORA17.1-201ENST00000362945 126 ntBASIC5.88□□□□□ -1.47
RB1P06400 SNORD1C-201ENST00000363315 78 ntBASIC5.88□□□□□ -1.47
RB1P06400 RNU1-149P-201ENST00000390870 161 ntBASIC5.88□□□□□ -1.47
RB1P06400 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.88□□□□□ -1.47
RB1P06400 AL358178.1-201ENST00000407698 397 ntBASIC5.88□□□□□ -1.47
RB1P06400 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.88□□□□□ -1.47
RB1P06400 SRSF1P1-201ENST00000424058 520 ntBASIC5.88□□□□□ -1.47
RB1P06400 MGAT2P2-201ENST00000427194 797 ntBASIC5.88□□□□□ -1.47
RB1P06400 FTLP19-201ENST00000433300 394 ntBASIC5.88□□□□□ -1.47
RB1P06400 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 Z80107.2-201ENST00000445127 392 ntBASIC5.88□□□□□ -1.47
RB1P06400 AL596266.1-201ENST00000448132 400 ntBASIC5.88□□□□□ -1.47
RB1P06400 RPL31P20-201ENST00000449593 360 ntBASIC5.88□□□□□ -1.47
RB1P06400 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.88□□□□□ -1.47
RB1P06400 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 SLC25A51P1-201ENST00000468432 871 ntBASIC5.88□□□□□ -1.47
RB1P06400 CEACAMP10-202ENST00000495431 496 ntBASIC5.88□□□□□ -1.47
RB1P06400 RNU6-941P-201ENST00000516346 108 ntBASIC5.88□□□□□ -1.47
RB1P06400 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.88□□□□□ -1.47
RB1P06400 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.88□□□□□ -1.47
RB1P06400 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.88□□□□□ -1.47
RB1P06400 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.88□□□□□ -1.47
RB1P06400 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RB1P06400 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RB1P06400 MIR4480-201ENST00000582492 71 ntBASIC5.88□□□□□ -1.47
RB1P06400 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 OR51C1P-201ENST00000608504 942 ntBASIC5.88□□□□□ -1.47
RB1P06400 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
RB1P06400 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RB1P06400 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
RB1P06400 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RB1P06400 AC125336.1-201ENST00000508893 2827 ntBASIC5.88□□□□□ -1.47
RB1P06400 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.88□□□□□ -1.47
RB1P06400 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RB1P06400 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
RB1P06400 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RB1P06400 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RB1P06400 AL133388.1-201ENST00000404509 287 ntBASIC5.87□□□□□ -1.47
RB1P06400 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.87□□□□□ -1.47
RB1P06400 AL356806.1-201ENST00000422524 916 ntBASIC5.87□□□□□ -1.47
RB1P06400 AC106901.1-201ENST00000425086 698 ntBASIC5.87□□□□□ -1.47
RB1P06400 AL445528.1-201ENST00000426330 420 ntBASIC5.87□□□□□ -1.47
RB1P06400 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.87□□□□□ -1.47
RB1P06400 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.87□□□□□ -1.47
RB1P06400 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.87□□□□□ -1.47
RB1P06400 AC091544.1-201ENST00000484702 348 ntBASIC5.87□□□□□ -1.47
RB1P06400 AC015864.1-201ENST00000496512 544 ntBASIC5.87□□□□□ -1.47
RB1P06400 OR51K1P-201ENST00000510214 950 ntBASIC5.87□□□□□ -1.47
RB1P06400 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms